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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro6_g005120
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro6_g005120
Seminavis robusta
4.7e-165
582.0
334
100.0
fso90180
Fistulifera solaris
3.9e-103
376.3
292
63.7
ptri86500
Phaeodactylum tricornutum
6.6e-103
375.6
272
67.6
fso195820
Fistulifera solaris
1.1e-102
374.8
292
64.0
sya00G262030
Synedra acus
2.8e-93
343.6
290
59.7
gene9565
Fragilariopsis cylindrus
1.0e-87
325.1
296
56.8
PSNMU-V1.4_AUG-EV-PASAV3_0059040
Pseudo-nitzschia multistriata
5.6e-86
319.3
287
56.8
ps00G93030
Pseudo-nitzschia multiseries
1.1e-81
305.1
208
68.3
CC00G138050
Cyclotella cryptica
2.4e-81
303.9
292
53.8
tps90140
Thalassiosira pseudonana
4.6e-72
273.1
208
61.5
tho47440
Thalassiosira oceanica
5.3e-68
259.6
294
49.0
Ec-27_006520
Ectocarpus siliculosus
1.3e-26
122.1
278
29.1
gsu12500
Galdieria sulphuraria
5.7e-22
106.7
235
26.4
tho582520
Thalassiosira oceanica
4.8e-21
103.6
74
67.6
CM05G00410
Cyanidioschyzon merolae
6.3e-21
103.2
236
30.9
AA0019G00150
Aureococcus anophagefferens
3.8e-18
94.0
196
30.6
Pp3c19_17570
Physcomitrella patens
1.6e-16
88.6
210
24.8
Pp3c21_14540
Physcomitrella patens
4.7e-16
87.0
210
24.8
AT2G20890
Arabidopsis thaliana
2.6e-14
81.3
212
24.5
Naga_100475g1
Nannochloropsis gaditana
3.1e-07
57.8
115
35.7
ccr181920
Chondrus crispus
4.0e-07
57.4
117
29.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
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