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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro670_g184730
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro670_g184730
Seminavis robusta
9.7e-195
680.6
338
100.0
Sro670_g184740
Seminavis robusta
1.1e-169
597.4
342
86.3
Sro1530_g280110
Seminavis robusta
1.6e-160
567.0
341
80.9
Sro1008_g230580
Seminavis robusta
5.9e-99
362.5
373
52.0
Sro13_g010210
Seminavis robusta
3.4e-38
160.6
332
33.4
fso188670
Fistulifera solaris
5.1e-34
146.7
327
33.0
fso157060
Fistulifera solaris
8.6e-34
146.0
342
32.2
sya00G143420
Synedra acus
5.8e-30
133.3
397
28.0
fso87180
Fistulifera solaris
8.4e-29
129.4
290
31.4
fso156280
Fistulifera solaris
1.9e-28
128.3
290
31.4
sya00G20270
Synedra acus
1.5e-22
108.6
254
30.3
Sro73_g040540
Seminavis robusta
2.5e-17
91.3
337
26.4
gene11584
Fragilariopsis cylindrus
2.0e-14
81.6
282
26.2
tho368220
Thalassiosira oceanica
4.4e-14
80.5
223
28.3
tps226020
Thalassiosira pseudonana
4.4e-14
80.5
226
22.6
CC00G201460
Cyclotella cryptica
7.9e-11
69.7
311
22.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (6 genes)
Synedra acus (2 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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