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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro3_g001980
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro3_g001980
Seminavis robusta
6.6e-241
834.3
423
100.0
Sro202_g085470
Seminavis robusta
2.3e-52
208.0
409
33.7
Sro218_g090170
Seminavis robusta
2.6e-43
177.9
403
33.0
Sro158_g071500
Seminavis robusta
3.1e-41
171.0
352
33.5
tps222350
Thalassiosira pseudonana
8.5e-39
162.9
395
29.9
tps232400
Thalassiosira pseudonana
7.2e-38
159.8
401
30.4
Sro1843_g301180
Seminavis robusta
5.7e-35
150.2
401
29.2
Sro1843_g301190
Seminavis robusta
8.3e-34
146.4
399
29.8
tho376700
Thalassiosira oceanica
7.7e-32
139.8
351
30.2
fso140140
Fistulifera solaris
5.5e-30
133.7
395
26.1
fso129830
Fistulifera solaris
9.5e-30
132.9
395
26.1
tho68000
Thalassiosira oceanica
4.7e-29
130.6
291
32.3
tps69300
Thalassiosira pseudonana
8.0e-29
129.8
365
29.3
tps232920
Thalassiosira pseudonana
4.0e-20
100.9
330
27.6
tps234210
Thalassiosira pseudonana
1.5e-19
99.0
415
23.9
tps210380
Thalassiosira pseudonana
1.1e-06
56.2
166
27.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (6 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (6 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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