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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro325_g117840
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro325_g117840
Seminavis robusta
6.8e-54
211.1
105
100.0
Sro158_g071660
Seminavis robusta
1.3e-44
180.3
102
85.3
sya00G76740
Synedra acus
1.3e-28
127.1
101
61.4
PSNMU-V1.4_AUG-EV-PASAV3_0006880
Pseudo-nitzschia multistriata
1.9e-27
123.2
101
60.4
fso21490
Fistulifera solaris
3.2e-27
122.5
101
57.4
fso112160
Fistulifera solaris
3.2e-27
122.5
101
57.4
PSNMU-V1.4_AUG-EV-PASAV3_0010630
Pseudo-nitzschia multistriata
4.1e-27
122.1
101
58.4
PSNMU-V1.4_AUG-EV-PASAV3_0007450
Pseudo-nitzschia multistriata
7.1e-27
121.3
101
58.4
PSNMU-V1.4_AUG-EV-PASAV3_0095170
Pseudo-nitzschia multistriata
9.2e-27
120.9
101
56.4
sya00G19730
Synedra acus
2.1e-26
119.8
101
61.4
sya00G45780
Synedra acus
2.7e-26
119.4
100
56.0
sya00G119770
Synedra acus
4.6e-26
118.6
101
59.4
PSNMU-V1.4_AUG-EV-PASAV3_0085240
Pseudo-nitzschia multistriata
1.0e-25
117.5
102
58.8
CC00G169820
Cyclotella cryptica
3.9e-25
115.5
102
53.9
sya00G160620
Synedra acus
5.1e-25
115.2
101
56.4
PSNMU-V1.4_AUG-EV-PASAV3_0071490
Pseudo-nitzschia multistriata
1.6e-23
110.2
103
52.4
sya00G179270
Synedra acus
1.6e-23
110.2
94
57.4
CC00G177430
Cyclotella cryptica
2.8e-23
109.4
101
51.5
CC00G118060
Cyclotella cryptica
6.2e-23
108.2
101
52.5
fso102290
Fistulifera solaris
6.2e-23
108.2
101
56.4
sya00G236130
Synedra acus
1.4e-22
107.1
87
58.6
CC00G57070
Cyclotella cryptica
1.8e-22
106.7
106
51.9
fso122320
Fistulifera solaris
3.1e-22
105.9
102
53.9
fso159750
Fistulifera solaris
3.1e-22
105.9
101
54.5
PSNMU-V1.4_AUG-EV-PASAV3_0053460
Pseudo-nitzschia multistriata
3.1e-22
105.9
102
53.9
CC00G151830
Cyclotella cryptica
6.8e-22
104.8
101
51.5
PSNMU-V1.4_AUG-EV-PASAV3_0101770
Pseudo-nitzschia multistriata
1.2e-21
104.0
103
52.4
CC00G143740
Cyclotella cryptica
2.0e-21
103.2
100
48.0
CC00G27860
Cyclotella cryptica
4.4e-21
102.1
101
54.5
CC00G58140
Cyclotella cryptica
4.4e-21
102.1
101
54.5
sya00G115070
Synedra acus
5.8e-21
101.7
101
50.5
PSNMU-V1.4_AUG-EV-PASAV3_0078090
Pseudo-nitzschia multistriata
7.6e-21
101.3
103
52.4
sya00G145070
Synedra acus
9.9e-21
100.9
101
53.5
CC00G202750
Cyclotella cryptica
1.7e-20
100.1
101
52.5
Sro2342_g324130
Seminavis robusta
2.2e-20
99.8
103
50.5
CC00G137730
Cyclotella cryptica
4.9e-20
98.6
101
52.5
CC00G171140
Cyclotella cryptica
6.4e-20
98.2
106
50.0
CC00G171670
Cyclotella cryptica
1.1e-19
97.4
106
48.1
sya00G07560
Synedra acus
1.4e-19
97.1
81
63.0
PSNMU-V1.4_AUG-EV-PASAV3_0088390
Pseudo-nitzschia multistriata
2.4e-19
96.3
101
44.6
PSNMU-V1.4_AUG-EV-PASAV3_0061400
Pseudo-nitzschia multistriata
3.2e-19
95.9
101
45.5
sya00G16890
Synedra acus
3.2e-19
95.9
101
47.5
tho37140
Thalassiosira oceanica
5.4e-19
95.1
102
45.1
CC00G104650
Cyclotella cryptica
7.1e-19
94.7
106
47.2
tho72160
Thalassiosira oceanica
9.2e-19
94.4
102
45.1
sya00G157350
Synedra acus
1.6e-18
93.6
101
49.5
sya00G129710
Synedra acus
2.1e-18
93.2
101
49.5
sya00G186490
Synedra acus
2.7e-18
92.8
101
45.5
CC00G34080
Cyclotella cryptica
4.6e-18
92.0
101
45.5
CC00G209510
Cyclotella cryptica
6.0e-18
91.7
102
46.1
CC00G92050
Cyclotella cryptica
7.8e-18
91.3
102
49.0
CC00G117070
Cyclotella cryptica
7.8e-18
91.3
102
46.1
CC00G108410
Cyclotella cryptica
1.7e-17
90.1
102
47.1
CC00G118650
Cyclotella cryptica
2.3e-17
89.7
103
42.7
CC00G190230
Cyclotella cryptica
3.0e-17
89.4
103
43.7
CC00G24730
Cyclotella cryptica
3.9e-17
89.0
102
46.1
CC00G148620
Cyclotella cryptica
3.9e-17
89.0
102
46.1
fso36690
Fistulifera solaris
3.9e-17
89.0
104
47.1
PSNMU-V1.4_AUG-EV-PASAV3_0039690
Pseudo-nitzschia multistriata
5.1e-17
88.6
101
44.6
CC00G78130
Cyclotella cryptica
6.6e-17
88.2
103
41.7
PSNMU-V1.4_AUG-EV-PASAV3_0076850
Pseudo-nitzschia multistriata
8.7e-17
87.8
82
54.9
tho579120
Thalassiosira oceanica
8.7e-17
87.8
102
48.0
tho55180
Thalassiosira oceanica
1.5e-16
87.0
102
47.1
tho273200
Thalassiosira oceanica
1.5e-16
87.0
102
47.1
PSNMU-V1.4_AUG-EV-PASAV3_0055470
Pseudo-nitzschia multistriata
1.9e-16
86.7
101
41.6
fso160210
Fistulifera solaris
2.5e-16
86.3
101
42.6
CC00G54730
Cyclotella cryptica
3.3e-16
85.9
102
44.1
sya00G82730
Synedra acus
4.3e-16
85.5
104
45.2
CC00G17990
Cyclotella cryptica
5.6e-16
85.1
102
42.2
sya00G118810
Synedra acus
1.2e-15
84.0
87
48.3
CC00G150720
Cyclotella cryptica
2.1e-15
83.2
94
47.9
tho296820
Thalassiosira oceanica
4.7e-15
82.0
100
42.0
sya00G50540
Synedra acus
6.2e-15
81.6
101
39.6
sya00G114720
Synedra acus
6.2e-15
81.6
102
41.2
sya00G135040
Synedra acus
6.2e-15
81.6
91
45.1
sya00G142100
Synedra acus
6.2e-15
81.6
99
43.4
tho57340
Thalassiosira oceanica
6.2e-15
81.6
100
42.0
sya00G167920
Synedra acus
1.4e-14
80.5
100
42.0
sya00G132040
Synedra acus
1.8e-14
80.1
91
44.0
CC00G27340
Cyclotella cryptica
4.0e-14
79.0
88
46.6
tho53680
Thalassiosira oceanica
5.3e-14
78.6
100
41.0
CC00G103300
Cyclotella cryptica
9.0e-14
77.8
80
52.5
sya00G135190
Synedra acus
9.0e-14
77.8
101
45.5
sya00G75660
Synedra acus
4.4e-13
75.5
92
42.4
sya00G15850
Synedra acus
5.8e-13
75.1
89
40.4
sya00G15860
Synedra acus
5.8e-13
75.1
89
40.4
sya00G80750
Synedra acus
5.8e-13
75.1
92
43.5
sya00G106280
Synedra acus
7.6e-13
74.7
91
41.8
sya00G51930
Synedra acus
9.9e-13
74.3
85
45.9
sya00G261860
Synedra acus
9.9e-13
74.3
87
41.4
sya00G241890
Synedra acus
1.7e-12
73.6
87
40.2
sya00G251430
Synedra acus
1.7e-12
73.6
78
44.9
tho288900
Thalassiosira oceanica
2.9e-12
72.8
97
40.2
sya00G48690
Synedra acus
1.1e-11
70.9
91
41.8
sya00G215600
Synedra acus
1.1e-11
70.9
101
34.7
sya00G111970
Synedra acus
1.4e-11
70.5
99
34.3
fso87390
Fistulifera solaris
2.4e-11
69.7
101
37.6
fso186580
Fistulifera solaris
3.2e-11
69.3
101
38.6
fso202720
Fistulifera solaris
3.2e-11
69.3
101
37.6
sya00G111980
Synedra acus
7.1e-11
68.2
80
50.0
sya00G131290
Synedra acus
1.7e-09
63.5
95
41.1
sya00G59210
Synedra acus
2.3e-09
63.2
90
35.6
sya00G238470
Synedra acus
2.3e-09
63.2
69
40.6
sya00G205350
Synedra acus
3.0e-09
62.8
87
40.2
fso63240
Fistulifera solaris
3.9e-09
62.4
102
35.3
fso109400
Fistulifera solaris
5.1e-09
62.0
101
32.7
fso85840
Fistulifera solaris
8.7e-09
61.2
101
32.7
sya00G67850
Synedra acus
8.7e-09
61.2
41
68.3
ps00G152180
Pseudo-nitzschia multiseries
1.1e-08
60.8
101
31.7
sya00G45620
Synedra acus
1.5e-08
60.5
67
44.8
sya00G135810
Synedra acus
1.9e-08
60.1
72
38.9
sya00G231330
Synedra acus
2.5e-08
59.7
62
41.9
sya00G164390
Synedra acus
3.3e-08
59.3
94
38.3
sya00G229010
Synedra acus
1.3e-07
57.4
84
36.9
sya00G269190
Synedra acus
1.3e-07
57.4
95
38.9
tho548060
Thalassiosira oceanica
3.6e-07
55.8
65
46.2
sya00G89840
Synedra acus
8.1e-07
54.7
95
34.7
ps00G29910
Pseudo-nitzschia multiseries
1.1e-06
54.3
90
40.0
sya00G60470
Synedra acus
1.8e-06
53.5
45
55.6
ps00G127300
Pseudo-nitzschia multiseries
2.4e-06
53.1
82
34.1
sya00G26220
Synedra acus
4.0e-06
52.4
49
53.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (10 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (13 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (28 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (3 genes)
Synedra acus (50 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (14 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing