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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro2213_g319300
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro2213_g319300
Seminavis robusta
0.0e+00
1096.6
587
100.0
sya00G248610
Synedra acus
3.2e-108
394.0
457
46.4
ptri138950
Phaeodactylum tricornutum
1.0e-106
389.0
533
39.4
sya00G172230
Synedra acus
1.1e-103
379.0
526
41.3
ps00G158510
Pseudo-nitzschia multiseries
1.2e-78
295.8
439
39.9
PSNMU-V1.4_AUG-EV-PASAV3_0055140
Pseudo-nitzschia multistriata
6.0e-75
283.5
451
37.7
gene11700
Fragilariopsis cylindrus
1.3e-66
255.8
476
35.5
Ec-14_006250
Ectocarpus siliculosus
9.4e-36
153.3
435
27.6
Naga_100011g25
Nannochloropsis gaditana
5.9e-30
134.0
399
28.6
CC00G33800
Cyclotella cryptica
1.3e-29
132.9
390
27.2
CC00G172110
Cyclotella cryptica
3.0e-26
121.7
404
27.7
FBgn0032303
Drosophila melanogaster
5.2e-26
120.9
393
26.5
Naga_100195g7
Nannochloropsis gaditana
8.8e-26
120.2
401
27.9
fso76940
Fistulifera solaris
1.5e-25
119.4
276
30.1
fso46390
Fistulifera solaris
2.0e-25
119.0
374
25.9
FBgn0029093
Drosophila melanogaster
4.4e-25
117.9
392
27.3
tps200090
Thalassiosira pseudonana
4.4e-25
117.9
384
25.5
emh375510
Emiliania huxleyi
7.4e-25
117.1
386
28.5
ENSG00000117984
Homo sapiens
7.4e-25
117.1
397
27.7
tps205150
Thalassiosira pseudonana
7.4e-25
117.1
386
25.6
fso115560
Fistulifera solaris
1.3e-24
116.3
470
24.7
ENSG00000196188
Homo sapiens
2.2e-24
115.5
396
26.5
AA0002G03460
Aureococcus anophagefferens
4.8e-24
114.4
252
31.3
AA0005G04690
Aureococcus anophagefferens
1.1e-23
113.2
393
27.2
Sro218_g090060
Seminavis robusta
1.8e-23
112.5
387
27.9
tho258180
Thalassiosira oceanica
3.1e-23
111.7
401
25.4
FBgn0032049
Drosophila melanogaster
5.3e-23
110.9
392
25.5
FBgn0032304
Drosophila melanogaster
5.3e-23
110.9
377
26.0
Ec-22_000090
Ectocarpus siliculosus
5.3e-23
110.9
385
26.2
sya00G199260
Synedra acus
7.0e-23
110.5
414
26.6
PSNMU-V1.4_AUG-EV-PASAV3_0044720
Pseudo-nitzschia multistriata
1.2e-22
109.8
406
25.4
ptri23690
Phaeodactylum tricornutum
1.2e-22
109.8
390
26.9
sya00G256010
Synedra acus
1.6e-22
109.4
407
26.5
fso24040
Fistulifera solaris
2.6e-22
108.6
389
27.0
pte729930
Paramecium tetraurelia
4.5e-22
107.8
401
25.7
pte696470
Paramecium tetraurelia
5.9e-22
107.5
403
25.8
CC00G112780
Cyclotella cryptica
7.7e-22
107.1
401
27.4
WBGene00000217
Caenorhabditis elegans
1.3e-21
106.3
383
27.2
fso198110
Fistulifera solaris
1.3e-21
106.3
389
26.2
ENSG00000096088
Homo sapiens
1.3e-21
106.3
381
26.8
ps00G71510
Pseudo-nitzschia multiseries
1.7e-21
105.9
384
25.3
WBGene00015700
Caenorhabditis elegans
2.2e-21
105.5
386
24.6
PSNMU-V1.4_AUG-EV-PASAV3_0103000
Pseudo-nitzschia multistriata
2.2e-21
105.5
419
25.1
YPL154C
Saccharomyces cerevisiae strain S288C
2.2e-21
105.5
381
26.0
pte419910
Paramecium tetraurelia
2.9e-21
105.1
403
25.6
pte308040
Paramecium tetraurelia
1.1e-20
103.2
401
25.2
pte767580
Paramecium tetraurelia
1.1e-20
103.2
399
26.6
pte742010
Paramecium tetraurelia
2.5e-20
102.1
400
27.5
WBGene00012683
Caenorhabditis elegans
4.2e-20
101.3
390
24.1
pte359760
Paramecium tetraurelia
4.2e-20
101.3
400
26.5
ENSG00000256713
Homo sapiens
5.5e-20
100.9
382
24.1
pte376810
Paramecium tetraurelia
5.5e-20
100.9
401
26.7
FBgn0033933
Drosophila melanogaster
7.2e-20
100.5
402
24.4
ENSG00000229859
Homo sapiens
7.2e-20
100.5
382
24.1
ENSG00000229183
Homo sapiens
7.2e-20
100.5
382
24.1
fso24810
Fistulifera solaris
9.4e-20
100.1
462
24.2
FBgn0053128
Drosophila melanogaster
1.2e-19
99.8
388
26.8
ENSG00000143839
Homo sapiens
1.6e-19
99.4
411
26.5
Pp3c5_19520
Physcomitrella patens
2.1e-19
99.0
291
29.2
pte744040
Paramecium tetraurelia
2.1e-19
99.0
403
24.1
Pp3c6_10690
Physcomitrella patens
2.7e-19
98.6
287
30.3
AT1G11910
Arabidopsis thaliana
4.7e-19
97.8
495
24.4
AT1G62290
Arabidopsis thaliana
4.7e-19
97.8
492
24.4
FBgn0038507
Drosophila melanogaster
8.0e-19
97.1
382
24.6
FBgn0011822
Drosophila melanogaster
8.0e-19
97.1
386
24.6
pte773920
Paramecium tetraurelia
8.0e-19
97.1
400
26.0
Sro676_g185650
Seminavis robusta
8.0e-19
97.1
417
26.6
gene16727
Fragilariopsis cylindrus
1.8e-18
95.9
391
25.1
AA0006G02020
Aureococcus anophagefferens
3.0e-18
95.1
413
25.9
tho278580
Thalassiosira oceanica
8.8e-18
93.6
388
24.5
Cre04.g226850
Chlamydomonas reinhardtii
2.6e-17
92.0
285
27.7
CC00G28710
Cyclotella cryptica
2.6e-17
92.0
391
26.3
WBGene00019105
Caenorhabditis elegans
5.7e-17
90.9
409
24.7
ps00G110300
Pseudo-nitzschia multiseries
5.7e-17
90.9
432
23.6
AT4G04460
Arabidopsis thaliana
7.5e-17
90.5
312
26.6
WBGene00017678
Caenorhabditis elegans
9.8e-17
90.1
393
23.2
WBGene00000218
Caenorhabditis elegans
2.8e-16
88.6
385
24.2
WBGene00019104
Caenorhabditis elegans
4.8e-16
87.8
400
24.8
WBGene00012681
Caenorhabditis elegans
4.8e-16
87.8
399
25.8
WBGene00000216
Caenorhabditis elegans
4.8e-16
87.8
398
24.9
FBgn0038506
Drosophila melanogaster
8.3e-16
87.0
380
24.5
WBGene00012682
Caenorhabditis elegans
1.4e-15
86.3
410
23.7
AT1G69100
Arabidopsis thaliana
1.8e-15
85.9
395
25.1
FBgn0051661
Drosophila melanogaster
1.8e-15
85.9
394
25.6
Pp3c15_10650
Physcomitrella patens
3.1e-15
85.1
274
28.8
WBGene00000219
Caenorhabditis elegans
4.1e-15
84.7
382
23.3
WBGene00000214
Caenorhabditis elegans
7.0e-15
84.0
392
24.5
ENSG00000131400
Homo sapiens
1.6e-14
82.8
393
25.2
pte343630
Paramecium tetraurelia
3.5e-14
81.6
397
25.4
WBGene00000215
Caenorhabditis elegans
5.9e-14
80.9
418
24.2
Sro197_g083740
Seminavis robusta
1.3e-13
79.7
383
24.0
WBGene00017881
Caenorhabditis elegans
2.2e-13
79.0
385
23.4
FBgn0051926
Drosophila melanogaster
2.2e-13
79.0
413
24.5
Naga_100138g2
Nannochloropsis gaditana
1.1e-12
76.6
428
24.1
WBGene00013973
Caenorhabditis elegans
1.9e-12
75.9
394
22.8
pte584640
Paramecium tetraurelia
5.5e-12
74.3
399
24.1
FBgn0038505
Drosophila melanogaster
2.1e-11
72.4
274
25.9
tho514420
Thalassiosira oceanica
2.1e-11
72.4
179
33.0
WBGene00007605
Caenorhabditis elegans
2.7e-11
72.0
414
23.9
AT4G22050
Arabidopsis thaliana
3.0e-10
68.6
284
25.4
pte72660
Paramecium tetraurelia
3.0e-10
68.6
380
24.7
pte548460
Paramecium tetraurelia
3.0e-10
68.6
398
22.1
pte467600
Paramecium tetraurelia
6.8e-10
67.4
405
22.2
pte236080
Paramecium tetraurelia
1.2e-09
66.6
394
24.1
SPAC26A3.01
Schizosaccharomyces pombe
2.0e-09
65.9
418
22.0
pte100140
Paramecium tetraurelia
3.4e-09
65.1
396
25.0
YLR121C
Saccharomyces cerevisiae strain S288C
1.3e-08
63.2
396
22.5
AA0013G00930
Aureococcus anophagefferens
1.7e-08
62.8
126
35.7
pte402350
Paramecium tetraurelia
1.7e-08
62.8
393
23.7
pte180400
Paramecium tetraurelia
6.3e-08
60.8
187
27.3
Ec-26_001770
Ectocarpus siliculosus
1.1e-07
60.1
171
31.0
pte539780
Paramecium tetraurelia
2.7e-06
55.5
177
30.5
gsu130900
Galdieria sulphuraria
4.5e-06
54.7
552
22.8
YLR120C
Saccharomyces cerevisiae strain S288C
4.5e-06
54.7
378
21.7
gsu52260
Galdieria sulphuraria
5.9e-06
54.3
418
23.4
gsu52280
Galdieria sulphuraria
5.9e-06
54.3
418
23.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (8 genes)
Drosophila melanogaster (12 genes)
Caenorhabditis elegans (16 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (20 genes)
Seminavis robusta (4 genes)
Synedra acus (4 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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