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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro1369_g266930
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro1369_g266930
Seminavis robusta
0.0e+00
1323.5
645
100.0
CC00G46510
Cyclotella cryptica
2.3e-99
364.8
698
37.7
gene14800
Fragilariopsis cylindrus
6.4e-94
346.7
650
37.8
ps00G29420
Pseudo-nitzschia multiseries
1.6e-89
332.0
665
36.2
PSNMU-V1.4_AUG-EV-PASAV3_0030360
Pseudo-nitzschia multistriata
6.4e-86
320.1
658
35.4
fso31390
Fistulifera solaris
1.5e-79
298.9
627
35.1
tho22100
Thalassiosira oceanica
9.8e-79
296.2
648
34.0
fso118670
Fistulifera solaris
5.1e-75
283.9
628
34.2
sya00G67070
Synedra acus
1.5e-34
149.4
319
35.1
Pp3c10_8190
Physcomitrella patens
2.5e-29
132.1
528
25.4
AT1G11880
Arabidopsis thaliana
9.0e-24
113.6
476
26.1
Ec-17_003500
Ectocarpus siliculosus
2.6e-18
95.5
607
23.4
FBgn0265174
Drosophila melanogaster
7.4e-18
94.0
479
24.4
ENSG00000060642
Homo sapiens
6.5e-14
80.9
503
23.7
SPAC18B11.05
Schizosaccharomyces pombe
2.4e-08
62.4
202
25.2
Cre07.g320650
Chlamydomonas reinhardtii
9.1e-08
60.5
615
21.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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