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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
SPBC17D11.02c
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
SPBC17D11.02c
Schizosaccharomyces pombe
0.0e+00
1215.7
678
100.0
Pp3c16_2890
Physcomitrella patens
7.5e-45
183.7
371
32.3
AT3G16090
Arabidopsis thaliana
8.6e-41
170.2
448
29.9
AT1G65040
Arabidopsis thaliana
1.2e-39
166.4
354
33.9
Naga_100011g51
Nannochloropsis gaditana
6.1e-39
164.1
472
28.2
gsu122750
Galdieria sulphuraria
4.1e-35
151.4
382
29.1
FBgn0039875
Drosophila melanogaster
2.9e-33
145.2
361
29.1
ccr128240
Chondrus crispus
6.6e-33
144.1
416
29.3
WBGene00004768
Caenorhabditis elegans
1.1e-32
143.3
351
28.8
ENSG00000162298
Homo sapiens
1.1e-32
143.3
360
28.9
CM07G01900
Cyanidioschyzon merolae
4.3e-32
141.4
354
29.7
gsu122730
Galdieria sulphuraria
2.1e-31
139.0
344
28.8
Cre04.g217922
Chlamydomonas reinhardtii
6.8e-30
134.0
350
29.1
AA0054G00050
Aureococcus anophagefferens
4.7e-23
111.3
291
28.9
ps00G146670
Pseudo-nitzschia multiseries
6.4e-20
100.9
357
27.5
gene4449
Fragilariopsis cylindrus
1.6e-18
96.3
383
27.7
Sro6_g005140
Seminavis robusta
2.7e-18
95.5
387
26.9
gene16176
Fragilariopsis cylindrus
3.5e-18
95.1
361
27.4
YOL013C
Saccharomyces cerevisiae strain S288C
7.8e-18
94.0
477
24.1
emh327260
Emiliania huxleyi
3.9e-17
91.7
297
30.3
tps27790
Thalassiosira pseudonana
2.5e-16
89.0
155
33.5
CC00G72160
Cyclotella cryptica
2.8e-15
85.5
155
31.6
emh103250
Emiliania huxleyi
1.1e-14
83.6
230
33.0
fso117030
Fistulifera solaris
1.4e-14
83.2
416
23.6
fso72960
Fistulifera solaris
2.3e-14
82.4
438
24.2
ENSG00000159461
Homo sapiens
7.6e-13
77.4
334
22.5
ptri26120
Phaeodactylum tricornutum
1.7e-12
76.3
438
23.3
sya00G39610
Synedra acus
1.1e-11
73.6
371
23.5
PSNMU-V1.4_AUG-EV-PASAV3_0044820
Pseudo-nitzschia multistriata
4.6e-10
68.2
357
26.3
emh266500
Emiliania huxleyi
1.7e-09
66.2
97
36.1
Pp3c13_9770
Physcomitrella patens
2.8e-07
58.9
421
23.0
Pp3c3_10340
Physcomitrella patens
1.1e-06
57.0
421
24.0
WBGene00014031
Caenorhabditis elegans
3.1e-06
55.5
91
33.0
gene20067
Fragilariopsis cylindrus
6.8e-06
54.3
142
26.8
pte644360
Paramecium tetraurelia
6.8e-06
54.3
44
50.0
tps190600
Thalassiosira pseudonana
8.9e-06
53.9
129
28.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing