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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c9_4700
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c9_4700
Physcomitrella patens
0.0e+00
3467.6
1730
100.0
Pp3c15_3560
Physcomitrella patens
0.0e+00
2335.8
1748
68.4
Pp3c17_2850
Physcomitrella patens
0.0e+00
2088.2
1741
62.7
Pp3c7_22570
Physcomitrella patens
2.6e-307
1057.0
1701
41.0
Pp3c2_29090
Physcomitrella patens
1.5e-304
1047.7
1805
38.0
gsu119960
Galdieria sulphuraria
2.3e-45
186.8
808
24.3
AT5G02310
Arabidopsis thaliana
5.6e-44
182.2
2035
21.1
Pp3c3_37220
Physcomitrella patens
1.6e-38
164.1
2207
20.8
Pp3c10_20380
Physcomitrella patens
5.0e-37
159.1
2203
20.7
Pp3c8_2940
Physcomitrella patens
1.1e-34
151.4
962
23.3
Pp3c8_2930
Physcomitrella patens
1.1e-34
151.4
962
23.3
Pp3c3_24510
Physcomitrella patens
5.2e-34
149.1
919
22.3
ENSG00000144357
Homo sapiens
6.8e-34
148.7
1941
20.4
ENSG00000159459
Homo sapiens
1.1e-31
141.4
1224
20.9
SPBC19C7.02
Schizosaccharomyces pombe
1.6e-30
137.5
1394
21.2
ENSG00000024048
Homo sapiens
1.4e-26
124.4
1264
21.0
Cre02.g089237
Chlamydomonas reinhardtii
1.1e-23
114.8
96
52.1
ccr96920
Chondrus crispus
9.5e-20
101.7
242
30.6
SPAC15A10.11
Schizosaccharomyces pombe
8.9e-18
95.1
1305
20.9
emh641100
Emiliania huxleyi
4.4e-17
92.8
143
39.9
emh202550
Emiliania huxleyi
4.1e-15
86.3
74
52.7
emh05340
Emiliania huxleyi
4.1e-15
86.3
74
52.7
gene16175
Fragilariopsis cylindrus
7.1e-15
85.5
103
36.9
gene4450
Fragilariopsis cylindrus
7.1e-15
85.5
103
36.9
FBgn0030809
Drosophila melanogaster
9.2e-15
85.1
138
34.8
PSNMU-V1.4_AUG-EV-PASAV3_0044840
Pseudo-nitzschia multistriata
1.2e-14
84.7
68
45.6
ps00G146680
Pseudo-nitzschia multiseries
1.6e-14
84.3
83
41.0
tps162180
Thalassiosira pseudonana
1.6e-14
84.3
68
45.6
ptri25880
Phaeodactylum tricornutum
2.1e-14
84.0
101
38.6
tps205130
Thalassiosira pseudonana
2.7e-14
83.6
110
34.5
ps00G39060
Pseudo-nitzschia multiseries
3.5e-14
83.2
80
42.5
sya00G187300
Synedra acus
3.5e-14
83.2
81
44.4
Sro1087_g239810
Seminavis robusta
6.0e-14
82.4
74
41.9
CC00G17000
Cyclotella cryptica
7.8e-14
82.0
98
38.8
fso50450
Fistulifera solaris
1.0e-13
81.6
69
44.9
fso117180
Fistulifera solaris
1.0e-13
81.6
69
44.9
fso22080
Fistulifera solaris
1.3e-13
81.3
68
44.1
Sro430_g141370
Seminavis robusta
1.3e-13
81.3
81
38.3
fso131290
Fistulifera solaris
1.7e-13
80.9
68
44.1
tho145400
Thalassiosira oceanica
1.7e-13
80.9
170
32.9
ptri97370
Phaeodactylum tricornutum
2.3e-13
80.5
69
44.9
sya00G144450
Synedra acus
5.1e-13
79.3
220
30.0
gene6541
Fragilariopsis cylindrus
6.6e-13
79.0
172
29.7
emh55720
Emiliania huxleyi
5.6e-12
75.9
102
36.3
Ec-11_002810
Ectocarpus siliculosus
1.6e-11
74.3
68
39.7
Naga_100023g38
Nannochloropsis gaditana
1.6e-11
74.3
117
30.8
sya00G61890
Synedra acus
3.6e-11
73.2
192
30.2
Sro397_g134430
Seminavis robusta
8.1e-11
72.0
60
45.0
WBGene00017373
Caenorhabditis elegans
1.1e-10
71.6
169
31.4
Naga_100073g7
Nannochloropsis gaditana
1.1e-10
71.6
68
36.8
CC00G109250
Cyclotella cryptica
2.6e-09
67.0
76
36.8
Sro397_g134410
Seminavis robusta
2.6e-09
67.0
89
36.0
Ec-21_002440
Ectocarpus siliculosus
1.7e-08
64.3
189
29.6
pte191380
Paramecium tetraurelia
1.7e-08
64.3
138
27.5
emh485450
Emiliania huxleyi
1.4e-07
61.2
111
34.2
pte703310
Paramecium tetraurelia
2.7e-06
57.0
73
35.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (4 genes)
Synedra acus (3 genes)
Physcomitrella patens (10 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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