Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c9_15240
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c9_15240
Physcomitrella patens
0.0e+00
8001.0
4099
100.0
ENSG00000253729
Homo sapiens
0.0e+00
1308.5
4295
27.2
pte640920
Paramecium tetraurelia
3.0e-120
436.8
4310
19.8
Naga_100223g3
Nannochloropsis gaditana
1.8e-93
347.8
1435
25.9
Ec-03_001100
Ectocarpus siliculosus
3.7e-62
243.8
723
27.5
YKL203C
Saccharomyces cerevisiae strain S288C
1.1e-45
189.1
754
26.5
YJR066W
Saccharomyces cerevisiae strain S288C
2.9e-43
181.0
743
24.9
FBgn0021796
Drosophila melanogaster
1.5e-42
178.7
693
25.3
gsu60470
Galdieria sulphuraria
1.4e-40
172.2
561
27.5
Sro182_g079310
Seminavis robusta
2.3e-40
171.4
781
26.0
gsu133660
Galdieria sulphuraria
3.0e-40
171.0
561
25.7
gene6550
Fragilariopsis cylindrus
4.0e-40
170.6
475
27.4
AT1G50030
Arabidopsis thaliana
9.8e-39
166.0
565
26.4
pte423930
Paramecium tetraurelia
9.8e-39
166.0
676
27.2
Cre09.g397327
Chlamydomonas reinhardtii
1.7e-38
165.2
504
29.0
Pp3c6_4910
Physcomitrella patens
1.7e-38
165.2
588
25.5
SPBC216.07c
Schizosaccharomyces pombe
8.3e-38
162.9
782
23.9
ptri96530
Phaeodactylum tricornutum
1.4e-37
162.2
368
30.2
SPBC30D10.10c
Schizosaccharomyces pombe
1.4e-37
162.2
687
25.0
emh448390
Emiliania huxleyi
3.1e-37
161.0
624
27.1
Naga_100063g26
Nannochloropsis gaditana
3.1e-37
161.0
672
26.5
WBGene00002583
Caenorhabditis elegans
4.1e-37
160.6
704
24.4
tps14600
Thalassiosira pseudonana
5.4e-37
160.2
688
25.1
ps00G56500
Pseudo-nitzschia multiseries
1.6e-36
158.7
330
32.1
fso64990
Fistulifera solaris
5.9e-36
156.8
334
30.8
Cre09.g400553
Chlamydomonas reinhardtii
1.0e-35
156.0
567
25.9
fso65350
Fistulifera solaris
1.3e-35
155.6
333
32.1
ENSG00000198793
Homo sapiens
1.7e-35
155.2
699
24.2
sya00G73490
Synedra acus
3.8e-35
154.1
330
32.1
pte01440
Paramecium tetraurelia
5.0e-35
153.7
797
25.0
CM18G00180
Cyanidioschyzon merolae
6.5e-35
153.3
641
27.1
CC00G44090
Cyclotella cryptica
1.5e-34
152.1
631
25.4
emh595980
Emiliania huxleyi
3.3e-34
151.0
421
28.3
AA0024G00400
Aureococcus anophagefferens
9.5e-34
149.4
586
26.6
Ec-04_000240
Ectocarpus siliculosus
9.5e-34
149.4
585
28.5
ENSG00000149311
Homo sapiens
1.6e-33
148.7
463
26.6
Naga_100037g16
Nannochloropsis gaditana
1.6e-33
148.7
432
29.4
ccr88100
Chondrus crispus
4.7e-33
147.1
429
26.3
ccr71660
Chondrus crispus
8.0e-33
146.4
759
23.3
Pp3c10_4250
Physcomitrella patens
1.4e-32
145.6
314
31.2
Ec-23_002960
Ectocarpus siliculosus
4.0e-32
144.1
333
30.6
tho88760
Thalassiosira oceanica
8.9e-32
142.9
469
25.8
ps00G184880
Pseudo-nitzschia multiseries
2.6e-31
141.4
468
26.3
AA0017G00800
Aureococcus anophagefferens
7.5e-31
139.8
424
27.1
gsu118320
Galdieria sulphuraria
1.3e-30
139.0
422
26.8
AA0003G03360
Aureococcus anophagefferens
1.7e-30
138.7
503
26.4
ENSG00000175054
Homo sapiens
3.7e-30
137.5
307
30.3
gene8536
Fragilariopsis cylindrus
2.4e-29
134.8
439
26.2
YBL088C
Saccharomyces cerevisiae strain S288C
2.4e-29
134.8
421
25.9
SPCC23B6.03c
Schizosaccharomyces pombe
4.1e-29
134.0
405
28.6
Pp3c2_23700
Physcomitrella patens
2.7e-28
131.3
423
27.4
Sro154_g070060
Seminavis robusta
1.0e-27
129.4
437
24.9
emh191960
Emiliania huxleyi
1.7e-27
128.6
300
31.7
WBGene00004879
Caenorhabditis elegans
2.3e-27
128.3
304
29.3
fso12980
Fistulifera solaris
6.6e-27
126.7
461
25.8
fso75640
Fistulifera solaris
6.6e-27
126.7
461
25.4
Ec-04_004450
Ectocarpus siliculosus
1.1e-26
125.9
425
25.4
SPBC216.05
Schizosaccharomyces pombe
1.1e-26
125.9
395
25.6
AA0020G00970
Aureococcus anophagefferens
2.5e-26
124.8
314
29.6
CM14G00750
Cyanidioschyzon merolae
4.3e-26
124.0
336
31.0
Cre13.g572050
Chlamydomonas reinhardtii
1.6e-25
122.1
329
29.5
ENSG00000157106
Homo sapiens
1.6e-25
122.1
329
27.4
ccr53360
Chondrus crispus
2.1e-25
121.7
325
26.8
ptri183550
Phaeodactylum tricornutum
2.1e-25
121.7
420
29.0
sya00G253840
Synedra acus
2.1e-25
121.7
439
27.6
CC00G11370
Cyclotella cryptica
4.7e-25
120.6
326
29.4
FBgn0004367
Drosophila melanogaster
1.8e-24
118.6
406
26.8
Pp3c6_3460
Physcomitrella patens
1.8e-24
118.6
322
27.6
Cre10.g467200
Chlamydomonas reinhardtii
3.0e-24
117.9
309
28.8
gsu37190
Galdieria sulphuraria
5.2e-24
117.1
325
27.7
AT5G40820
Arabidopsis thaliana
8.9e-24
116.3
351
27.9
Naga_100690g2
Nannochloropsis gaditana
2.6e-23
114.8
292
29.5
tho57660
Thalassiosira oceanica
2.6e-23
114.8
293
29.7
Sro98_g050510
Seminavis robusta
3.4e-23
114.4
414
24.6
sya00G114570
Synedra acus
3.4e-23
114.4
423
27.7
AT3G48190
Arabidopsis thaliana
4.4e-23
114.0
341
26.4
fso00810
Fistulifera solaris
4.4e-23
114.0
347
28.5
AT2G17930
Arabidopsis thaliana
9.8e-23
112.8
1378
20.5
Naga_100012g19
Nannochloropsis gaditana
2.2e-22
111.7
313
29.1
Ec-04_002480
Ectocarpus siliculosus
2.9e-22
111.3
317
29.0
ps00G76540
Pseudo-nitzschia multiseries
3.7e-22
110.9
304
29.3
ptri105360
Phaeodactylum tricornutum
3.7e-22
110.9
325
28.6
emh639960
Emiliania huxleyi
6.4e-22
110.2
626
21.7
emh94000
Emiliania huxleyi
8.3e-22
109.8
611
21.8
emh416420
Emiliania huxleyi
1.1e-21
109.4
118
50.0
fso39040
Fistulifera solaris
1.4e-21
109.0
339
27.4
PSNMU-V1.4_AUG-EV-PASAV3_0010960
Pseudo-nitzschia multistriata
1.4e-21
109.0
311
29.9
AA0002G00790
Aureococcus anophagefferens
9.2e-21
106.3
308
28.9
FBgn0263968
Drosophila melanogaster
1.2e-20
105.9
352
26.7
Cre13.g564350
Chlamydomonas reinhardtii
2.7e-20
104.8
272
30.9
CC00G24240
Cyclotella cryptica
2.7e-20
104.8
391
27.1
FBgn0045035
Drosophila melanogaster
7.8e-20
103.2
279
28.0
YBR136W
Saccharomyces cerevisiae strain S288C
7.8e-20
103.2
331
26.9
PSNMU-V1.4_AUG-EV-PASAV3_0013470
Pseudo-nitzschia multistriata
1.3e-19
102.4
239
29.7
emh371550
Emiliania huxleyi
3.9e-19
100.9
431
23.2
WBGene00000227
Caenorhabditis elegans
5.0e-19
100.5
294
28.9
AT4G36080
Arabidopsis thaliana
2.5e-18
98.2
1214
20.6
tps60950
Thalassiosira pseudonana
9.5e-18
96.3
339
26.8
gene12720
Fragilariopsis cylindrus
2.1e-17
95.1
293
28.0
AA0004G01310
Aureococcus anophagefferens
2.8e-17
94.7
333
25.8
gene20842
Fragilariopsis cylindrus
2.8e-17
94.7
293
28.0
tps224750
Thalassiosira pseudonana
8.0e-17
93.2
388
24.5
CC00G03640
Cyclotella cryptica
4.4e-15
87.4
342
25.1
WBGene00000226
Caenorhabditis elegans
5.8e-15
87.0
261
27.6
SPBP16F5.03c
Schizosaccharomyces pombe
9.8e-15
86.3
1150
20.3
Naga_100183g1
Nannochloropsis gaditana
4.9e-14
84.0
178
35.4
YHR099W
Saccharomyces cerevisiae strain S288C
6.4e-14
83.6
692
21.5
Pp3c17_20000
Physcomitrella patens
4.1e-13
80.9
765
20.9
ENSG00000196367
Homo sapiens
9.2e-13
79.7
1340
18.3
tho123640
Thalassiosira oceanica
7.8e-12
76.6
288
26.4
Naga_100037g8
Nannochloropsis gaditana
1.3e-11
75.9
382
21.7
fso123360
Fistulifera solaris
6.6e-11
73.6
394
21.6
tps71380
Thalassiosira pseudonana
6.6e-11
73.6
409
22.2
FBgn0053554
Drosophila melanogaster
2.5e-10
71.6
364
20.6
pte352150
Paramecium tetraurelia
2.1e-09
68.6
343
22.7
Ec-04_004490
Ectocarpus siliculosus
3.6e-09
67.8
113
37.2
ptri32140
Phaeodactylum tricornutum
5.8e-07
60.5
232
26.3
tps13120
Thalassiosira pseudonana
1.7e-06
58.9
250
21.2
PSNMU-V1.4_AUG-EV-PASAV3_0115840
Pseudo-nitzschia multistriata
2.2e-06
58.5
248
24.6
emh365240
Emiliania huxleyi
2.9e-06
58.2
87
39.1
emh152940
Emiliania huxleyi
2.9e-06
58.2
87
39.1
fso168260
Fistulifera solaris
2.9e-06
58.2
240
24.6
ENSG00000078142
Homo sapiens
8.3e-06
56.6
239
23.8
pte477240
Paramecium tetraurelia
8.3e-06
56.6
234
26.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (5 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (6 genes)
Ectocarpus siliculosus (6 genes)
Nannochloropsis gaditana (7 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (5 genes)
Caenorhabditis elegans (4 genes)
Saccharomyces cerevisiae strain S288C (5 genes)
Schizosaccharomyces pombe (5 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (9 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (3 genes)
Synedra acus (3 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (5 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing