Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c8_17220
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c8_17220
Physcomitrella patens
0.0e+00
1976.1
1042
100.0
AT2G31320
Arabidopsis thaliana
3.2e-289
996.1
1047
51.9
ENSG00000143799
Homo sapiens
6.3e-176
619.8
1105
35.6
FBgn0010247
Drosophila melanogaster
3.6e-139
497.7
1089
31.4
ENSG00000129484
Homo sapiens
1.3e-101
372.9
514
41.8
Pp3c1_22640
Physcomitrella patens
1.9e-100
369.0
792
30.6
WBGene00004049
Caenorhabditis elegans
9.0e-98
360.1
1060
30.2
AT4G02390
Arabidopsis thaliana
3.5e-94
348.2
499
39.9
Pp3c22_13240
Physcomitrella patens
1.3e-93
346.3
537
39.1
AT5G22470
Arabidopsis thaliana
5.6e-92
340.9
763
30.1
pte68730
Paramecium tetraurelia
8.4e-80
300.4
516
34.9
Sro1616_g286270
Seminavis robusta
4.6e-78
294.7
510
35.7
pte591900
Paramecium tetraurelia
6.7e-77
290.8
514
37.0
pte237100
Paramecium tetraurelia
9.6e-76
287.0
451
37.7
pte139850
Paramecium tetraurelia
6.3e-75
284.3
485
35.7
emh410120
Emiliania huxleyi
1.9e-68
262.7
530
35.8
pte427070
Paramecium tetraurelia
1.4e-66
256.5
520
32.7
emh663610
Emiliania huxleyi
6.5e-64
247.7
545
31.9
emh105980
Emiliania huxleyi
3.0e-61
238.8
495
32.3
ENSG00000041880
Homo sapiens
2.6e-60
235.7
489
33.9
pte130650
Paramecium tetraurelia
8.8e-53
210.7
557
30.2
Pp3c8_13220
Physcomitrella patens
1.7e-51
206.5
217
48.8
Sro633_g178800
Seminavis robusta
2.2e-51
206.1
494
31.2
ccr70840
Chondrus crispus
3.7e-51
205.3
489
29.9
pte409990
Paramecium tetraurelia
6.5e-48
194.5
519
28.3
pte447380
Paramecium tetraurelia
1.1e-47
193.7
537
28.1
pte587580
Paramecium tetraurelia
2.5e-47
192.6
562
28.3
Ec-17_003060
Ectocarpus siliculosus
1.0e-45
187.2
494
29.4
Sro1047_g235110
Seminavis robusta
1.1e-42
177.2
456
32.0
Sro1169_g248640
Seminavis robusta
2.0e-41
172.9
551
28.5
emh53760
Emiliania huxleyi
2.5e-39
166.0
180
50.0
pte733580
Paramecium tetraurelia
8.8e-37
157.5
511
25.4
WBGene00004053
Caenorhabditis elegans
2.7e-25
119.4
433
24.7
WBGene00004050
Caenorhabditis elegans
1.4e-18
97.1
538
22.3
pte417050
Paramecium tetraurelia
2.4e-18
96.3
216
31.0
AT3G14890
Arabidopsis thaliana
3.0e-16
89.4
211
30.3
ENSG00000102699
Homo sapiens
8.6e-16
87.8
360
25.8
pte768540
Paramecium tetraurelia
2.5e-15
86.3
521
20.7
Pp3c6_17140
Physcomitrella patens
9.5e-07
57.8
90
36.7
emh467840
Emiliania huxleyi
1.6e-06
57.0
79
39.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (12 genes)
Seminavis robusta (4 genes)
Synedra acus (0 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing