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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c2_20690
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c2_20690
Physcomitrella patens
1.3e-222
773.9
535
100.0
Pp3c1_19400
Physcomitrella patens
3.5e-191
669.5
535
90.1
Pp3c1_15750
Physcomitrella patens
8.7e-190
664.8
535
89.5
Pp3c1_14980
Physcomitrella patens
3.1e-171
603.2
537
85.1
AT3G06720
Arabidopsis thaliana
1.3e-156
554.7
538
73.8
Pp3c2_20660
Physcomitrella patens
1.4e-155
551.2
536
81.3
AT4G02150
Arabidopsis thaliana
3.9e-137
490.0
537
72.3
AT4G16143
Arabidopsis thaliana
4.6e-130
466.5
537
63.1
AT1G09270
Arabidopsis thaliana
7.6e-117
422.5
539
62.7
Cre04.g215850
Chlamydomonas reinhardtii
3.5e-114
413.7
536
66.8
Sro190_g081800
Seminavis robusta
6.9e-94
346.3
552
51.6
emh630580
Emiliania huxleyi
2.6e-93
344.4
526
58.7
emh87490
Emiliania huxleyi
3.4e-93
344.0
504
60.3
gene1481
Fragilariopsis cylindrus
1.3e-92
342.0
540
58.3
Ec-06_010020
Ectocarpus siliculosus
4.2e-91
337.0
547
58.0
CC00G57700
Cyclotella cryptica
5.1e-89
330.1
560
55.7
AA0005G01170
Aureococcus anophagefferens
2.1e-87
324.7
463
62.4
ps00G15650
Pseudo-nitzschia multiseries
2.1e-87
324.7
542
57.6
AT1G02690
Arabidopsis thaliana
3.7e-87
323.9
541
54.0
fso142400
Fistulifera solaris
4.0e-86
320.5
543
55.4
ptri79640
Phaeodactylum tricornutum
4.0e-86
320.5
548
55.8
fso138040
Fistulifera solaris
9.0e-86
319.3
543
55.1
Naga_100025g3
Nannochloropsis gaditana
4.9e-84
313.5
283
70.3
AT3G05720
Arabidopsis thaliana
5.7e-80
300.1
428
67.5
tps81770
Thalassiosira pseudonana
4.8e-79
297.0
558
53.8
gsu115000
Galdieria sulphuraria
2.4e-78
294.7
530
59.4
gsu58870
Galdieria sulphuraria
3.1e-78
294.3
535
53.8
AT5G49310
Arabidopsis thaliana
4.1e-78
293.9
513
45.8
ccr144980
Chondrus crispus
3.0e-73
277.7
528
53.8
AT5G52000
Arabidopsis thaliana
1.1e-64
249.2
419
51.6
AA0005G05820
Aureococcus anophagefferens
3.7e-63
244.2
506
41.3
CM20G00960
Cyanidioschyzon merolae
3.1e-62
241.1
608
46.7
sya00G29650
Synedra acus
1.0e-60
236.1
483
54.5
FBgn0024889
Drosophila melanogaster
2.7e-58
228.0
547
43.0
emh327020
Emiliania huxleyi
1.1e-54
216.1
450
42.2
tps62720
Thalassiosira pseudonana
1.5e-51
205.7
526
37.8
CC00G181010
Cyclotella cryptica
1.9e-51
205.3
518
40.3
pte678530
Paramecium tetraurelia
2.7e-50
201.4
339
44.0
pte499220
Paramecium tetraurelia
3.6e-50
201.1
339
44.0
sya00G86210
Synedra acus
7.5e-48
193.4
344
35.8
Naga_100210g8
Nannochloropsis gaditana
1.3e-44
182.6
236
44.5
FBgn0267727
Drosophila melanogaster
1.1e-43
179.5
277
51.3
emh734390
Emiliania huxleyi
2.6e-40
168.3
538
27.5
FBgn0027338
Drosophila melanogaster
7.5e-40
166.8
499
39.3
pte794670
Paramecium tetraurelia
9.8e-40
166.4
292
45.2
ENSG00000196911
Homo sapiens
3.7e-39
164.5
533
42.6
Ec-06_010170
Ectocarpus siliculosus
1.2e-37
159.5
265
38.5
SPCC962.03c
Schizosaccharomyces pombe
4.5e-37
157.5
262
51.5
ENSG00000186432
Homo sapiens
1.3e-36
156.0
240
39.6
ENSG00000182481
Homo sapiens
1.7e-36
155.6
267
49.4
ptri73900
Phaeodactylum tricornutum
2.9e-36
154.8
566
26.1
Ec-21_003780
Ectocarpus siliculosus
5.0e-36
154.1
213
51.2
ENSG00000102753
Homo sapiens
5.0e-36
154.1
237
39.7
Sro1070_g237780
Seminavis robusta
1.5e-35
152.5
461
32.3
ENSG00000025800
Homo sapiens
1.9e-35
152.1
526
41.4
tho101480
Thalassiosira oceanica
4.2e-35
151.0
246
37.0
WBGene00002074
Caenorhabditis elegans
1.6e-34
149.1
277
41.5
ENSG00000114030
Homo sapiens
2.1e-34
148.7
431
50.1
Ec-11_005880
Ectocarpus siliculosus
3.6e-34
147.9
234
38.5
Ec-06_010200
Ectocarpus siliculosus
1.8e-33
145.6
270
37.0
Ec-06_010180
Ectocarpus siliculosus
1.8e-33
145.6
270
37.0
ENSG00000185467
Homo sapiens
5.2e-33
144.1
259
47.1
Ec-03_002730
Ectocarpus siliculosus
8.8e-33
143.3
301
40.5
Naga_100068g7
Nannochloropsis gaditana
2.0e-32
142.1
258
45.3
ps00G02620
Pseudo-nitzschia multiseries
9.8e-32
139.8
442
30.8
sya00G21100
Synedra acus
9.8e-32
139.8
277
59.2
PSNMU-V1.4_AUG-EV-PASAV3_0031160
Pseudo-nitzschia multistriata
1.8e-30
135.6
556
28.1
WBGene00002073
Caenorhabditis elegans
2.4e-30
135.2
344
32.6
AA0308G00020
Aureococcus anophagefferens
4.1e-30
134.4
287
34.5
YNL189W
Saccharomyces cerevisiae strain S288C
2.7e-29
131.7
166
47.0
AA0017G00730
Aureococcus anophagefferens
1.0e-28
129.8
282
34.4
emh323340
Emiliania huxleyi
5.6e-27
124.0
98
64.3
gene17663
Fragilariopsis cylindrus
3.6e-26
121.3
466
30.3
pte397010
Paramecium tetraurelia
1.0e-25
119.8
313
26.8
pte200570
Paramecium tetraurelia
1.8e-25
119.0
434
24.9
Cre04.g224650
Chlamydomonas reinhardtii
9.8e-24
113.2
269
42.8
pte396910
Paramecium tetraurelia
6.4e-23
110.5
329
27.1
SPBC1604.08c
Schizosaccharomyces pombe
8.3e-23
110.2
455
44.8
Ec-19_000990
Ectocarpus siliculosus
1.8e-22
109.0
213
33.8
AA0003G03170
Aureococcus anophagefferens
4.1e-22
107.8
249
33.3
Pp3c21_840
Physcomitrella patens
2.5e-19
98.6
337
26.1
emh65920
Emiliania huxleyi
7.3e-19
97.1
175
36.6
AT5G03070
Arabidopsis thaliana
1.6e-18
95.9
309
25.6
Sro2493_g329210
Seminavis robusta
1.6e-18
95.9
258
40.7
Pp3c18_21610
Physcomitrella patens
4.7e-18
94.4
346
25.7
fso100360
Fistulifera solaris
2.3e-17
92.0
81
51.9
FBgn0035657
Drosophila melanogaster
8.9e-17
90.1
218
27.5
pte12450
Paramecium tetraurelia
8.9e-17
90.1
278
24.8
sya00G05300
Synedra acus
2.2e-15
85.5
164
38.4
pte62800
Paramecium tetraurelia
2.9e-15
85.1
321
24.9
Pp3c14_26820
Physcomitrella patens
3.7e-15
84.7
100
54.0
AT1G32880
Arabidopsis thaliana
1.9e-14
82.4
73
58.9
fso194180
Fistulifera solaris
2.4e-14
82.0
165
34.5
fso107170
Fistulifera solaris
4.1e-14
81.3
161
34.2
ps00G02660
Pseudo-nitzschia multiseries
1.6e-13
79.3
528
22.0
gene6597
Fragilariopsis cylindrus
2.7e-13
78.6
147
37.4
ps00G36350
Pseudo-nitzschia multiseries
2.7e-13
78.6
163
35.6
ptri97330
Phaeodactylum tricornutum
3.5e-13
78.2
118
40.7
tps117000
Thalassiosira pseudonana
1.0e-12
76.6
125
38.4
Sro513_g157860
Seminavis robusta
3.0e-12
75.1
125
36.8
gsu123810
Galdieria sulphuraria
4.3e-11
71.2
284
40.5
Cre07.g312900
Chlamydomonas reinhardtii
2.8e-10
68.6
234
26.1
gene17662
Fragilariopsis cylindrus
6.2e-10
67.4
209
29.2
pte68710
Paramecium tetraurelia
3.1e-09
65.1
185
24.3
pte236600
Paramecium tetraurelia
4.0e-09
64.7
166
22.3
pte43320
Paramecium tetraurelia
2.0e-08
62.4
117
33.3
pte100560
Paramecium tetraurelia
1.7e-07
59.3
155
21.9
ptri74080
Phaeodactylum tricornutum
9.2e-06
53.5
78
39.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (5 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (5 genes)
Ectocarpus siliculosus (8 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (10 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (12 genes)
Seminavis robusta (4 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing