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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c2_20660
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c2_20660
Physcomitrella patens
1.5e-189
664.1
533
100.0
Pp3c1_15750
Physcomitrella patens
2.2e-164
580.5
533
82.6
Pp3c1_14980
Physcomitrella patens
8.5e-161
568.5
535
90.5
Pp3c2_20690
Physcomitrella patens
2.0e-154
547.4
536
81.3
Pp3c1_19400
Physcomitrella patens
1.1e-147
525.0
534
78.8
AT3G06720
Arabidopsis thaliana
6.6e-129
462.6
536
68.8
AT4G16143
Arabidopsis thaliana
1.2e-127
458.4
535
71.4
AT4G02150
Arabidopsis thaliana
8.9e-110
399.1
537
66.1
AT1G09270
Arabidopsis thaliana
2.9e-108
394.0
540
68.9
Sro190_g081800
Seminavis robusta
3.4e-93
344.0
553
59.7
Ec-06_010020
Ectocarpus siliculosus
1.3e-89
332.0
549
65.2
gene1481
Fragilariopsis cylindrus
6.6e-89
329.7
549
64.8
CC00G57700
Cyclotella cryptica
1.1e-86
322.4
559
63.5
AA0005G01170
Aureococcus anophagefferens
5.3e-86
320.1
463
71.7
AT1G02690
Arabidopsis thaliana
1.3e-84
315.5
542
61.8
Cre04.g215850
Chlamydomonas reinhardtii
2.4e-83
311.2
544
59.0
emh630580
Emiliania huxleyi
2.4e-83
311.2
527
62.8
fso138040
Fistulifera solaris
2.4e-83
311.2
555
63.1
fso142400
Fistulifera solaris
2.4e-83
311.2
555
63.1
ptri79640
Phaeodactylum tricornutum
2.4e-83
311.2
560
62.7
ps00G15650
Pseudo-nitzschia multiseries
7.1e-83
309.7
557
63.4
emh87490
Emiliania huxleyi
4.6e-82
307.0
513
63.7
Naga_100025g3
Nannochloropsis gaditana
1.5e-80
302.0
290
66.9
tps81770
Thalassiosira pseudonana
2.6e-77
291.2
561
61.0
gsu115000
Galdieria sulphuraria
2.5e-72
274.6
529
67.5
AT5G49310
Arabidopsis thaliana
4.3e-72
273.9
524
54.2
ccr144980
Chondrus crispus
3.7e-71
270.8
533
61.4
gsu58870
Galdieria sulphuraria
6.5e-68
260.0
535
57.0
sya00G29650
Synedra acus
2.7e-58
228.0
482
63.9
FBgn0024889
Drosophila melanogaster
3.6e-58
227.6
541
51.2
AT3G05720
Arabidopsis thaliana
1.7e-52
208.8
429
59.4
CC00G181010
Cyclotella cryptica
5.5e-51
203.8
519
49.5
CM20G00960
Cyanidioschyzon merolae
3.6e-50
201.1
608
48.4
AA0005G05820
Aureococcus anophagefferens
1.5e-48
195.7
505
42.0
tps62720
Thalassiosira pseudonana
1.7e-47
192.2
506
47.0
AT5G52000
Arabidopsis thaliana
1.6e-42
175.6
419
45.3
FBgn0267727
Drosophila melanogaster
1.4e-41
172.6
279
49.5
Naga_100210g8
Nannochloropsis gaditana
3.0e-41
171.4
226
44.7
emh327020
Emiliania huxleyi
1.1e-40
169.5
238
56.7
sya00G86210
Synedra acus
6.3e-39
163.7
297
36.7
FBgn0027338
Drosophila melanogaster
7.0e-38
160.2
501
48.5
pte794670
Paramecium tetraurelia
1.2e-37
159.5
292
45.9
pte499220
Paramecium tetraurelia
2.6e-37
158.3
292
43.8
pte678530
Paramecium tetraurelia
3.5e-37
157.9
292
44.9
ENSG00000196911
Homo sapiens
1.7e-36
155.6
532
51.3
Ec-21_003780
Ectocarpus siliculosus
1.2e-34
149.4
203
51.2
ENSG00000186432
Homo sapiens
1.6e-34
149.1
248
38.3
ENSG00000025800
Homo sapiens
2.1e-34
148.7
527
50.7
WBGene00002074
Caenorhabditis elegans
3.6e-34
147.9
524
49.8
ENSG00000102753
Homo sapiens
1.0e-33
146.4
257
37.4
ENSG00000182481
Homo sapiens
3.0e-33
144.8
246
50.0
ENSG00000114030
Homo sapiens
5.2e-33
144.1
444
59.5
SPCC962.03c
Schizosaccharomyces pombe
8.8e-33
143.3
260
48.8
Sro1070_g237780
Seminavis robusta
1.2e-32
142.9
437
39.6
Ec-06_010170
Ectocarpus siliculosus
1.6e-29
132.5
219
39.3
ENSG00000185467
Homo sapiens
4.5e-29
131.0
255
46.7
tho101480
Thalassiosira oceanica
1.7e-28
129.0
263
33.5
YNL189W
Saccharomyces cerevisiae strain S288C
1.1e-27
126.3
172
46.5
emh323340
Emiliania huxleyi
4.2e-27
124.4
96
64.6
gene17663
Fragilariopsis cylindrus
5.5e-27
124.0
477
38.4
ptri73900
Phaeodactylum tricornutum
1.2e-26
122.9
309
30.4
emh734390
Emiliania huxleyi
2.1e-26
122.1
525
23.8
Ec-06_010200
Ectocarpus siliculosus
6.1e-26
120.6
266
35.3
Ec-06_010180
Ectocarpus siliculosus
6.1e-26
120.6
266
35.3
Ec-11_005880
Ectocarpus siliculosus
4.0e-25
117.9
211
36.0
SPBC1604.08c
Schizosaccharomyces pombe
6.3e-23
110.5
453
54.3
Ec-03_002730
Ectocarpus siliculosus
1.1e-22
109.8
211
45.5
sya00G21100
Synedra acus
1.1e-22
109.8
280
65.7
WBGene00002073
Caenorhabditis elegans
2.4e-22
108.6
290
32.1
Cre04.g224650
Chlamydomonas reinhardtii
5.4e-22
107.5
254
44.5
Naga_100068g7
Nannochloropsis gaditana
2.0e-21
105.5
264
39.8
ps00G02620
Pseudo-nitzschia multiseries
2.7e-21
105.1
214
38.3
AA0308G00020
Aureococcus anophagefferens
7.7e-21
103.6
243
35.0
AA0017G00730
Aureococcus anophagefferens
2.5e-19
98.6
238
33.6
pte397010
Paramecium tetraurelia
1.6e-18
95.9
224
28.6
Ec-19_000990
Ectocarpus siliculosus
4.7e-18
94.4
203
32.0
emh65920
Emiliania huxleyi
1.0e-17
93.2
183
34.4
fso100360
Fistulifera solaris
2.0e-16
89.0
81
50.6
PSNMU-V1.4_AUG-EV-PASAV3_0031160
Pseudo-nitzschia multistriata
2.6e-16
88.6
551
24.0
AT1G32880
Arabidopsis thaliana
5.7e-16
87.4
82
56.1
pte200570
Paramecium tetraurelia
4.9e-15
84.3
241
27.0
AA0003G03170
Aureococcus anophagefferens
1.1e-14
83.2
231
29.9
Pp3c18_21610
Physcomitrella patens
2.0e-13
79.0
316
24.7
Pp3c21_840
Physcomitrella patens
2.7e-13
78.6
307
25.4
Sro2493_g329210
Seminavis robusta
2.7e-13
78.6
227
41.4
pte396910
Paramecium tetraurelia
3.5e-13
78.2
254
25.6
FBgn0035657
Drosophila melanogaster
4.5e-13
77.8
197
26.4
AT5G03070
Arabidopsis thaliana
1.7e-12
75.9
295
24.1
Pp3c14_26820
Physcomitrella patens
7.3e-11
70.5
97
48.5
gene17662
Fragilariopsis cylindrus
1.2e-10
69.7
205
28.3
Cre07.g312900
Chlamydomonas reinhardtii
3.0e-09
65.1
218
28.4
sya00G05300
Synedra acus
2.0e-08
62.4
106
34.9
pte236600
Paramecium tetraurelia
5.8e-08
60.8
267
19.1
ps00G02660
Pseudo-nitzschia multiseries
2.2e-07
58.9
277
23.8
pte100560
Paramecium tetraurelia
2.2e-07
58.9
191
20.4
pte12450
Paramecium tetraurelia
4.9e-07
57.8
237
22.8
pte68710
Paramecium tetraurelia
4.9e-07
57.8
268
21.3
pte43320
Paramecium tetraurelia
6.4e-07
57.4
87
33.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (3 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (5 genes)
Ectocarpus siliculosus (8 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (10 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (11 genes)
Seminavis robusta (3 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing