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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c26_370
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c26_370
Physcomitrella patens
0.0e+00
3485.7
1752
100.0
AT5G20320
Arabidopsis thaliana
1.8e-228
795.0
1432
36.4
Pp3c23_3450
Physcomitrella patens
1.4e-215
752.3
1565
35.0
AT3G03300
Arabidopsis thaliana
4.9e-205
717.2
1448
35.4
AT1G01040
Arabidopsis thaliana
1.3e-194
682.6
1578
32.3
Pp3c2_15900
Physcomitrella patens
6.6e-186
653.7
1612
31.1
AT3G43920
Arabidopsis thaliana
1.1e-153
546.6
1496
29.3
ENSG00000100697
Homo sapiens
2.1e-83
313.2
1964
23.2
ccr82040
Chondrus crispus
1.8e-82
310.1
1498
26.2
SPCC188.13c
Schizosaccharomyces pombe
1.4e-79
300.4
1473
25.3
Pp3c1_24950
Physcomitrella patens
3.3e-68
262.7
863
27.3
Pp3c24_9630
Physcomitrella patens
5.6e-68
261.9
657
31.2
FBgn0034246
Drosophila melanogaster
4.7e-67
258.8
1565
22.4
WBGene00000939
Caenorhabditis elegans
8.1e-67
258.1
1927
21.3
Pp3c1_24960
Physcomitrella patens
2.6e-65
253.1
1449
24.6
tho62080
Thalassiosira oceanica
3.6e-51
206.1
1425
23.4
CC00G76810
Cyclotella cryptica
6.2e-51
205.3
1421
23.8
FBgn0039016
Drosophila melanogaster
4.4e-49
199.1
538
31.0
fso92300
Fistulifera solaris
6.4e-48
195.3
1461
24.0
fso152880
Fistulifera solaris
8.7e-45
184.9
1465
22.9
Ec-22_003870
Ectocarpus siliculosus
3.2e-39
166.4
599
26.0
Sro263_g102230
Seminavis robusta
2.7e-38
163.3
1573
22.3
PSNMU-V1.4_AUG-EV-PASAV3_0069080
Pseudo-nitzschia multistriata
3.8e-32
142.9
1547
20.9
emh334790
Emiliania huxleyi
1.4e-31
141.0
697
26.4
ccr166220
Chondrus crispus
9.3e-31
138.3
674
24.6
AT3G20420
Arabidopsis thaliana
2.3e-29
133.7
241
35.7
gene20191
Fragilariopsis cylindrus
2.5e-28
130.2
1452
21.6
pte139590
Paramecium tetraurelia
2.5e-28
130.2
795
22.5
sya00G69470
Synedra acus
3.7e-27
126.3
967
21.6
AT4G15417
Arabidopsis thaliana
4.8e-27
125.9
261
33.7
Naga_100010g67
Nannochloropsis gaditana
1.2e-25
121.3
684
24.1
AT5G45150
Arabidopsis thaliana
3.4e-25
119.8
174
39.1
gene20124
Fragilariopsis cylindrus
7.6e-25
118.6
543
25.4
ENSG00000107201
Homo sapiens
3.8e-24
116.3
538
25.3
ENSG00000115267
Homo sapiens
1.9e-23
114.0
537
25.1
Sro2140_g316210
Seminavis robusta
1.9e-23
114.0
606
23.4
Cre02.g141000
Chlamydomonas reinhardtii
2.5e-23
113.6
229
31.4
WBGene00008400
Caenorhabditis elegans
5.5e-23
112.5
604
24.5
SPAC20H4.04
Schizosaccharomyces pombe
6.7e-21
105.5
528
24.1
Sro263_g102360
Seminavis robusta
7.4e-20
102.1
508
24.2
Sro111_g055380
Seminavis robusta
7.4e-20
102.1
551
22.5
WBGene00001090
Caenorhabditis elegans
1.3e-19
101.3
571
25.2
fso138110
Fistulifera solaris
6.3e-19
99.0
542
23.2
ENSG00000108771
Homo sapiens
8.2e-19
98.6
542
25.3
CM12G03130
Cyanidioschyzon merolae
1.4e-18
97.8
554
24.5
gsu125320
Galdieria sulphuraria
1.8e-18
97.4
534
24.2
fso142330
Fistulifera solaris
3.1e-18
96.7
542
22.9
pte304000
Paramecium tetraurelia
1.5e-17
94.4
492
23.8
sya00G217700
Synedra acus
2.2e-16
90.5
535
23.0
ps00G110620
Pseudo-nitzschia multiseries
2.9e-16
90.1
237
30.0
SPAC9.05
Schizosaccharomyces pombe
8.5e-16
88.6
516
22.9
pte628690
Paramecium tetraurelia
1.1e-15
88.2
317
25.2
gene8473
Fragilariopsis cylindrus
1.9e-15
87.4
557
22.8
pte363500
Paramecium tetraurelia
2.5e-15
87.0
808
22.4
Ec-16_000030
Ectocarpus siliculosus
7.2e-15
85.5
622
22.0
ptri84620
Phaeodactylum tricornutum
1.6e-14
84.3
573
22.3
pte533530
Paramecium tetraurelia
2.7e-14
83.6
336
23.8
CC00G24770
Cyclotella cryptica
3.6e-14
83.2
521
23.4
FBgn0038889
Drosophila melanogaster
3.6e-14
83.2
553
23.1
ENSG00000187790
Homo sapiens
4.6e-14
82.8
562
23.1
ps00G110610
Pseudo-nitzschia multiseries
1.4e-13
81.3
277
28.9
CC00G76870
Cyclotella cryptica
2.5e-12
77.0
563
24.3
AT1G35530
Arabidopsis thaliana
4.3e-12
76.3
511
24.9
Ec-09_003090
Ectocarpus siliculosus
5.7e-12
75.9
146
31.5
Pp3c20_9530
Physcomitrella patens
7.4e-12
75.5
506
24.7
AA0004G00300
Aureococcus anophagefferens
2.2e-11
73.9
498
21.1
tho98840
Thalassiosira oceanica
2.2e-11
73.9
543
22.8
Ec-09_003130
Ectocarpus siliculosus
8.2e-11
72.0
117
36.8
Ec-09_003100
Ectocarpus siliculosus
8.2e-11
72.0
117
36.8
Ec-10_002470
Ectocarpus siliculosus
1.4e-10
71.2
528
21.4
PSNMU-V1.4_AUG-EV-PASAV3_0010100
Pseudo-nitzschia multistriata
1.8e-10
70.9
604
21.5
Cre16.g684715
Chlamydomonas reinhardtii
2.4e-10
70.5
237
25.7
emh539100
Emiliania huxleyi
3.4e-09
66.6
523
21.6
pte730470
Paramecium tetraurelia
3.4e-09
66.6
409
22.5
emh162060
Emiliania huxleyi
1.7e-08
64.3
523
21.4
pte156020
Paramecium tetraurelia
2.2e-08
63.9
381
19.9
tps80220
Thalassiosira pseudonana
2.2e-08
63.9
131
35.1
CC00G36900
Cyclotella cryptica
6.5e-08
62.4
93
43.0
pte01400
Paramecium tetraurelia
1.4e-07
61.2
370
22.4
sya00G201390
Synedra acus
1.9e-07
60.8
145
30.3
Cre07.g345900
Chlamydomonas reinhardtii
5.5e-07
59.3
68
52.9
emh694630
Emiliania huxleyi
7.2e-07
58.9
253
25.3
Cre03.g208833
Chlamydomonas reinhardtii
2.1e-06
57.4
93
34.4
YIR002C
Saccharomyces cerevisiae strain S288C
2.7e-06
57.0
73
41.1
ps00G72730
Pseudo-nitzschia multiseries
7.9e-06
55.5
91
36.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (6 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (8 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (8 genes)
Seminavis robusta (4 genes)
Synedra acus (3 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing