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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c26_11830
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c26_11830
Physcomitrella patens
0.0e+00
1489.6
759
100.0
Pp3c4_29960
Physcomitrella patens
0.0e+00
1104.4
761
75.7
AT2G16090
Arabidopsis thaliana
6.6e-183
642.5
487
60.2
AT4G34370
Arabidopsis thaliana
6.6e-175
615.9
511
55.4
AT3G27710
Arabidopsis thaliana
3.1e-156
553.9
499
52.7
Cre17.g721950
Chlamydomonas reinhardtii
2.8e-117
424.5
511
40.9
AT3G27720
Arabidopsis thaliana
3.8e-114
414.1
489
44.4
WBGene00016157
Caenorhabditis elegans
7.5e-62
240.4
431
33.6
AT2G31770
Arabidopsis thaliana
6.4e-61
237.3
484
29.8
Ec-14_005210
Ectocarpus siliculosus
2.4e-60
235.3
481
29.7
WBGene00016158
Caenorhabditis elegans
7.1e-60
233.8
427
32.6
AT2G31760
Arabidopsis thaliana
1.2e-59
233.0
479
29.4
ENSG00000166233
Homo sapiens
1.6e-59
232.6
454
30.4
Pp3c8_15350
Physcomitrella patens
3.5e-59
231.5
485
31.8
FBgn0036082
Drosophila melanogaster
1.3e-58
229.6
440
31.4
Naga_100011g90
Nannochloropsis gaditana
6.6e-58
227.3
471
29.9
FBgn0017418
Drosophila melanogaster
8.6e-58
226.9
455
29.5
WBGene00013538
Caenorhabditis elegans
1.1e-57
226.5
436
31.0
Pp3c24_15470
Physcomitrella patens
1.9e-57
225.7
485
31.1
WBGene00016156
Caenorhabditis elegans
2.5e-57
225.3
426
32.6
Pp3c23_14640
Physcomitrella patens
5.6e-57
224.2
485
30.7
AT2G31780
Arabidopsis thaliana
9.5e-57
223.4
400
32.5
emh699000
Emiliania huxleyi
8.1e-56
220.3
438
33.1
emh221500
Emiliania huxleyi
8.1e-56
220.3
438
33.1
Pp3c20_6730
Physcomitrella patens
1.1e-55
219.9
485
30.3
sya00G196680
Synedra acus
3.4e-54
214.9
489
29.9
AT2G31510
Arabidopsis thaliana
5.8e-54
214.2
484
29.3
fso90780
Fistulifera solaris
5.8e-54
214.2
465
29.7
fso146630
Fistulifera solaris
7.6e-54
213.8
465
29.5
SPAC328.02
Schizosaccharomyces pombe
2.9e-53
211.8
439
30.1
AT1G05890
Arabidopsis thaliana
4.9e-53
211.1
490
29.0
FBgn0025186
Drosophila melanogaster
4.1e-52
208.0
459
29.2
AA0005G02300
Aureococcus anophagefferens
3.5e-51
204.9
469
30.7
Sro813_g206190
Seminavis robusta
7.8e-51
203.8
491
28.5
AT1G65430
Arabidopsis thaliana
1.0e-50
203.4
486
29.2
ptri02260
Phaeodactylum tricornutum
5.6e-49
197.6
472
29.4
tps128410
Thalassiosira pseudonana
1.2e-46
189.9
448
27.7
tho90240
Thalassiosira oceanica
1.5e-46
189.5
507
26.6
ps00G01890
Pseudo-nitzschia multiseries
4.4e-46
188.0
485
27.4
AA0003G04200
Aureococcus anophagefferens
5.8e-46
187.6
459
28.5
Cre16.g682350
Chlamydomonas reinhardtii
1.2e-43
179.9
548
27.4
gene16363
Fragilariopsis cylindrus
4.6e-43
177.9
483
27.1
PSNMU-V1.4_AUG-EV-PASAV3_0053250
Pseudo-nitzschia multistriata
3.0e-42
175.3
487
26.7
ENSG00000177479
Homo sapiens
3.9e-42
174.9
420
27.4
ENSG00000001629
Homo sapiens
2.1e-40
169.1
367
27.5
WBGene00020462
Caenorhabditis elegans
2.8e-40
168.7
417
28.1
YKR017C
Saccharomyces cerevisiae strain S288C
6.2e-40
167.5
448
29.2
Sro212_g088220
Seminavis robusta
1.2e-38
163.3
481
26.4
gene8976
Fragilariopsis cylindrus
3.2e-36
155.2
483
24.6
CC00G198020
Cyclotella cryptica
1.6e-35
152.9
277
31.8
gene1079
Fragilariopsis cylindrus
2.1e-35
152.5
373
27.1
sya00G260640
Synedra acus
7.9e-35
150.6
459
26.8
emh662990
Emiliania huxleyi
1.3e-34
149.8
250
30.4
sya00G94170
Synedra acus
4.3e-33
144.8
317
31.2
ENSG00000112659
Homo sapiens
1.4e-31
139.8
428
28.0
ps00G36530
Pseudo-nitzschia multiseries
1.8e-31
139.4
416
27.9
AT5G08730
Arabidopsis thaliana
3.1e-31
138.7
428
25.0
pte422070
Paramecium tetraurelia
2.2e-29
132.5
448
23.9
pte58600
Paramecium tetraurelia
1.9e-28
129.4
434
22.6
pte772850
Paramecium tetraurelia
3.2e-28
128.6
205
32.2
Sro2627_g332970
Seminavis robusta
7.9e-27
124.0
404
23.5
ps00G53990
Pseudo-nitzschia multiseries
1.8e-26
122.9
559
23.3
sya00G93300
Synedra acus
2.3e-26
122.5
401
25.7
sya00G198510
Synedra acus
2.3e-26
122.5
459
24.8
Sro1131_g244690
Seminavis robusta
6.7e-26
120.9
371
25.6
pte303500
Paramecium tetraurelia
1.1e-25
120.2
198
31.8
gene9072
Fragilariopsis cylindrus
2.1e-24
115.9
350
28.0
pte704790
Paramecium tetraurelia
2.1e-24
115.9
204
31.9
gene87
Fragilariopsis cylindrus
3.7e-24
115.2
350
28.0
pte189240
Paramecium tetraurelia
3.7e-24
115.2
198
30.8
emh387300
Emiliania huxleyi
1.4e-23
113.2
232
28.4
emh198170
Emiliania huxleyi
1.4e-23
113.2
232
29.3
pte146170
Paramecium tetraurelia
4.0e-23
111.7
235
31.1
emh117900
Emiliania huxleyi
5.3e-23
111.3
222
28.4
ENSG00000013561
Homo sapiens
4.5e-22
108.2
224
30.4
pte124410
Paramecium tetraurelia
4.9e-21
104.8
208
29.8
fso37280
Fistulifera solaris
6.5e-21
104.4
484
21.1
AT5G63750
Arabidopsis thaliana
8.4e-21
104.0
456
24.1
sya00G79950
Synedra acus
1.9e-20
102.8
456
21.7
fso23580
Fistulifera solaris
2.5e-20
102.4
484
20.9
PSNMU-V1.4_AUG-EV-PASAV3_0100940
Pseudo-nitzschia multistriata
4.2e-20
101.7
442
22.4
pte727370
Paramecium tetraurelia
4.2e-20
101.7
182
26.4
gene19497
Fragilariopsis cylindrus
9.3e-20
100.5
428
22.7
Naga_100247g8
Nannochloropsis gaditana
1.2e-19
100.1
246
31.3
Sro2_g001650
Seminavis robusta
1.2e-19
100.1
299
25.1
emh744920
Emiliania huxleyi
1.6e-19
99.8
235
26.4
pte678030
Paramecium tetraurelia
1.6e-19
99.8
197
28.9
pte794170
Paramecium tetraurelia
2.1e-19
99.4
349
24.4
sya00G210660
Synedra acus
2.1e-19
99.4
457
21.4
AT5G63760
Arabidopsis thaliana
6.0e-19
97.8
393
28.2
pte125900
Paramecium tetraurelia
6.0e-19
97.8
183
28.4
pte159620
Paramecium tetraurelia
1.8e-18
96.3
378
24.9
pte319050
Paramecium tetraurelia
1.1e-17
93.6
179
29.1
pte499680
Paramecium tetraurelia
1.5e-17
93.2
197
25.9
AT5G63730
Arabidopsis thaliana
9.7e-17
90.5
398
22.1
pte655290
Paramecium tetraurelia
1.6e-16
89.7
197
27.9
pte775490
Paramecium tetraurelia
2.2e-16
89.4
192
28.6
SPAC1002.14
Schizosaccharomyces pombe
2.2e-16
89.4
227
23.3
pte360110
Paramecium tetraurelia
2.8e-16
89.0
203
28.1
ptri122500
Phaeodactylum tricornutum
2.8e-16
89.0
287
24.0
pte429270
Paramecium tetraurelia
1.4e-15
86.7
221
26.2
pte152430
Paramecium tetraurelia
3.1e-15
85.5
218
25.2
WBGene00015926
Caenorhabditis elegans
1.2e-14
83.6
210
27.1
Pp3c16_13540
Physcomitrella patens
1.2e-14
83.6
212
28.3
Sro9_g007010
Seminavis robusta
1.5e-14
83.2
267
28.1
WBGene00018966
Caenorhabditis elegans
4.5e-14
81.6
219
26.0
Pp3c5_8660
Physcomitrella patens
2.9e-13
79.0
205
27.3
Sro1343_g264600
Seminavis robusta
2.9e-13
79.0
253
27.3
pte245480
Paramecium tetraurelia
5.0e-13
78.2
205
28.8
FBgn0041100
Drosophila melanogaster
8.5e-13
77.4
217
28.1
pte145210
Paramecium tetraurelia
1.9e-12
76.3
201
26.9
AT3G45580
Arabidopsis thaliana
2.5e-12
75.9
282
24.8
emh544870
Emiliania huxleyi
2.5e-12
75.9
248
25.4
Sro368_g128040
Seminavis robusta
2.5e-12
75.9
215
27.0
ENSG00000185345
Homo sapiens
3.2e-12
75.5
250
26.0
ccr160800
Chondrus crispus
7.2e-12
74.3
200
23.5
pte661140
Paramecium tetraurelia
2.7e-11
72.4
193
25.4
ps00G33840
Pseudo-nitzschia multiseries
6.1e-11
71.2
250
24.0
AT5G37560
Arabidopsis thaliana
7.9e-11
70.9
212
26.4
WBGene00018964
Caenorhabditis elegans
1.0e-10
70.5
193
24.4
Cre05.g238374
Chlamydomonas reinhardtii
1.0e-10
70.5
204
26.5
Sro426_g140530
Seminavis robusta
1.4e-10
70.1
207
26.6
pte751320
Paramecium tetraurelia
1.8e-10
69.7
225
23.1
AT3G53690
Arabidopsis thaliana
5.1e-10
68.2
209
24.9
Ec-01_005320
Ectocarpus siliculosus
6.7e-10
67.8
176
26.7
pte40240
Paramecium tetraurelia
8.8e-10
67.4
193
24.9
AT5G60250
Arabidopsis thaliana
1.5e-09
66.6
248
24.6
AT3G45470
Arabidopsis thaliana
1.9e-09
66.2
202
26.2
AT4G19670
Arabidopsis thaliana
4.3e-09
65.1
211
23.7
pte197070
Paramecium tetraurelia
1.7e-08
63.2
214
25.2
pte491370
Paramecium tetraurelia
1.7e-08
63.2
192
23.4
AT2G21420
Arabidopsis thaliana
2.2e-08
62.8
223
26.5
gene4960
Fragilariopsis cylindrus
2.8e-08
62.4
111
29.7
Sro1484_g276460
Seminavis robusta
2.8e-08
62.4
249
23.7
gene9067
Fragilariopsis cylindrus
6.3e-08
61.2
250
23.2
gene93
Fragilariopsis cylindrus
6.3e-08
61.2
250
23.2
Naga_101270g2
Nannochloropsis gaditana
6.3e-08
61.2
146
30.8
Sro156_g070730
Seminavis robusta
6.3e-08
61.2
230
24.8
AT2G25360
Arabidopsis thaliana
1.4e-07
60.1
212
23.6
PSNMU-V1.4_AUG-EV-PASAV3_0108820
Pseudo-nitzschia multistriata
1.4e-07
60.1
255
22.4
pte553380
Paramecium tetraurelia
1.4e-07
60.1
183
25.7
AT3G43750
Arabidopsis thaliana
3.1e-07
58.9
176
26.1
WBGene00003967
Caenorhabditis elegans
3.1e-07
58.9
208
23.1
ENSG00000011275
Homo sapiens
3.1e-07
58.9
207
23.7
AT2G25370
Arabidopsis thaliana
4.1e-07
58.5
187
24.1
pte645740
Paramecium tetraurelia
5.3e-07
58.2
191
25.7
pte427250
Paramecium tetraurelia
6.9e-07
57.8
224
25.0
pte553360
Paramecium tetraurelia
1.2e-06
57.0
182
24.2
tps57210
Thalassiosira pseudonana
1.2e-06
57.0
84
35.7
CC00G162140
Cyclotella cryptica
2.0e-06
56.2
39
53.8
CC00G204130
Cyclotella cryptica
2.0e-06
56.2
39
53.8
AT3G45480
Arabidopsis thaliana
5.9e-06
54.7
200
25.5
Sro2334_g323780
Seminavis robusta
7.7e-06
54.3
117
29.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (9 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (9 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (25 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (8 genes)
Paramecium tetraurelia (31 genes)
Seminavis robusta (12 genes)
Synedra acus (7 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing