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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c26_11300
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c26_11300
Physcomitrella patens
1.3e-307
1056.2
527
100.0
syaM00420
Synedra acus
5.5e-35
150.6
370
28.6
psm_mito00620
Pseudo-nitzschia multiseries
1.7e-28
129.0
365
26.3
ptri_mito00160
Phaeodactylum tricornutum
5.5e-27
124.0
402
27.6
Sro884_mit_g215780
Seminavis robusta
7.9e-26
120.2
368
25.3
tpsM00020
Thalassiosira pseudonana
1.3e-25
119.4
366
25.7
AT1G30010
Arabidopsis thaliana
3.0e-25
118.2
465
25.4
AT5G46920
Arabidopsis thaliana
3.0e-25
118.2
490
24.7
psm_mito00640
Pseudo-nitzschia multiseries
4.8e-23
110.9
416
26.4
sac00190
Saccharomyces cerevisiae strain S288C
5.3e-22
107.5
373
25.5
syaM00430
Synedra acus
1.3e-20
102.8
461
24.5
Pp3c6_21460
Physcomitrella patens
3.8e-20
101.3
389
25.4
sac00110
Saccharomyces cerevisiae strain S288C
8.5e-20
100.1
382
27.2
Pp3c20_1870
Physcomitrella patens
1.1e-11
73.2
238
26.1
Pp3c15_17460
Physcomitrella patens
5.5e-11
70.9
207
23.2
Pp3c15_3410
Physcomitrella patens
9.4e-11
70.1
240
23.8
Pp3c2_27600
Physcomitrella patens
1.7e-07
59.3
206
25.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
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MAFFT
Tree construction algorithm
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PhyML
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