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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c21_15430
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c21_15430
Physcomitrella patens
9.2e-117
421.0
225
100.0
Pp3c21_13430
Physcomitrella patens
9.9e-111
401.0
231
93.9
Pp3c11_16260
Physcomitrella patens
1.6e-55
217.6
192
57.8
AT5G13450
Arabidopsis thaliana
1.8e-40
167.5
214
40.7
ENSG00000241837
Homo sapiens
5.7e-34
146.0
188
39.4
WBGene00000230
Caenorhabditis elegans
2.7e-31
137.1
202
39.1
FBgn0016691
Drosophila melanogaster
5.6e-29
129.4
198
34.3
gene14016
Fragilariopsis cylindrus
1.8e-27
124.4
216
34.3
ps00G01800
Pseudo-nitzschia multiseries
2.3e-27
124.0
212
34.9
ptri180750
Phaeodactylum tricornutum
8.9e-27
122.1
177
35.0
tps208450
Thalassiosira pseudonana
1.7e-25
117.9
176
35.2
sya00G66650
Synedra acus
4.9e-25
116.3
176
33.0
sya00G66660
Synedra acus
4.9e-25
116.3
176
33.0
YDR298C
Saccharomyces cerevisiae strain S288C
9.2e-24
112.1
206
35.4
CC00G159510
Cyclotella cryptica
1.6e-23
111.3
203
30.0
tho290880
Thalassiosira oceanica
1.6e-23
111.3
198
31.3
SPCC1840.06
Schizosaccharomyces pombe
7.8e-23
109.0
219
32.0
fso25330
Fistulifera solaris
3.0e-22
107.1
197
31.5
fso116180
Fistulifera solaris
3.0e-22
107.1
197
31.5
Sro1247_g255840
Seminavis robusta
3.9e-22
106.7
208
35.1
ccr147380
Chondrus crispus
1.5e-21
104.8
190
28.9
Cre16.g680000
Chlamydomonas reinhardtii
4.3e-21
103.2
226
30.5
CM05G01980
Cyanidioschyzon merolae
1.4e-19
98.2
204
28.9
CM07G00040
Cyanidioschyzon merolae
1.4e-19
98.2
204
28.9
sya00G10830
Synedra acus
3.1e-19
97.1
170
34.7
sya00G268780
Synedra acus
1.5e-18
94.7
170
32.9
emh315740
Emiliania huxleyi
3.4e-18
93.6
208
30.8
ENSG00000249209
Homo sapiens
2.9e-17
90.5
120
39.2
AA0011G01800
Aureococcus anophagefferens
1.7e-14
81.3
180
28.3
tho603300
Thalassiosira oceanica
1.6e-12
74.7
129
34.1
pte150650
Paramecium tetraurelia
1.1e-11
72.0
174
26.4
ptri_chlor01430
Phaeodactylum tricornutum
3.1e-11
70.5
174
25.9
pte347800
Paramecium tetraurelia
2.0e-10
67.8
210
28.6
gsu28270
Galdieria sulphuraria
2.6e-10
67.4
168
23.8
pte391730
Paramecium tetraurelia
1.3e-09
65.1
209
27.3
AACG00310
Aureococcus anophagefferens
1.7e-09
64.7
174
23.6
Cre11.g467569
Chlamydomonas reinhardtii
3.7e-09
63.5
210
25.7
pte120150
Paramecium tetraurelia
3.7e-09
63.5
174
24.7
Pp3c23_11680
Physcomitrella patens
1.4e-08
61.6
179
22.9
ccr_chlor00G01450
Chondrus crispus
3.5e-07
57.0
170
27.1
fsoC01680
Fistulifera solaris
3.5e-07
57.0
177
24.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (3 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (1 genes)
Synedra acus (4 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing