Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c1_32190
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c1_32190
Physcomitrella patens
1.2e-59
230.3
116
100.0
Pp3c14_15140
Physcomitrella patens
2.8e-53
209.1
111
92.8
Pp3c14_15141
Physcomitrella patens
2.8e-53
209.1
111
92.8
Pp3c1_32170
Physcomitrella patens
1.4e-52
206.8
110
93.6
Pp3c17_5780
Physcomitrella patens
1.2e-51
203.8
111
92.8
Pp3c14_15040
Physcomitrella patens
2.0e-51
203.0
111
92.8
Pp3c14_15110
Physcomitrella patens
2.0e-51
203.0
111
92.8
AT2G05630
Arabidopsis thaliana
1.8e-47
189.9
108
84.3
Cre16.g689650
Chlamydomonas reinhardtii
2.3e-47
189.5
104
89.4
AT3G60640
Arabidopsis thaliana
4.0e-47
188.7
110
84.5
AT1G62040
Arabidopsis thaliana
9.8e-46
184.1
105
83.8
AT4G16520
Arabidopsis thaliana
3.7e-45
182.2
105
86.7
AT2G45170
Arabidopsis thaliana
4.9e-45
181.8
106
84.0
AT4G04620
Arabidopsis thaliana
8.3e-45
181.0
111
76.6
AT4G21980
Arabidopsis thaliana
1.4e-44
180.3
105
81.9
SPBP8B7.24c
Schizosaccharomyces pombe
1.7e-42
173.3
106
79.2
ptri11060
Phaeodactylum tricornutum
2.8e-40
166.0
108
72.2
YBL078C
Saccharomyces cerevisiae strain S288C
2.8e-40
166.0
106
76.4
emh415060
Emiliania huxleyi
3.6e-40
165.6
107
72.0
emh174470
Emiliania huxleyi
3.6e-40
165.6
107
72.0
Ec-16_001520
Ectocarpus siliculosus
6.2e-40
164.9
104
76.0
PSNMU-V1.4_AUG-EV-PASAV3_0064080
Pseudo-nitzschia multistriata
1.4e-39
163.7
108
71.3
fso193610
Fistulifera solaris
3.1e-39
162.5
105
73.3
sya00G110880
Synedra acus
3.1e-39
162.5
104
74.0
Sro802_g204580
Seminavis robusta
4.0e-39
162.2
104
74.0
sya00G111110
Synedra acus
5.2e-39
161.8
106
72.6
tho143300
Thalassiosira oceanica
5.2e-39
161.8
108
71.3
CC00G00810
Cyclotella cryptica
6.8e-39
161.4
105
72.4
CC00G73890
Cyclotella cryptica
6.8e-39
161.4
105
72.4
CC00G142660
Cyclotella cryptica
6.8e-39
161.4
105
72.4
tps88450
Thalassiosira pseudonana
6.8e-39
161.4
105
72.4
gene6315
Fragilariopsis cylindrus
1.2e-38
160.6
105
72.4
ps00G49290
Pseudo-nitzschia multiseries
1.5e-38
160.2
105
72.4
FBgn0052672
Drosophila melanogaster
8.6e-34
144.4
108
64.8
emh493620
Emiliania huxleyi
9.5e-33
141.0
119
62.2
ENSG00000170296
Homo sapiens
9.5e-33
141.0
106
62.3
AA0025G00620
Aureococcus anophagefferens
6.2e-32
138.3
115
61.7
WBGene00002980
Caenorhabditis elegans
2.3e-31
136.3
109
59.6
FBgn0038539
Drosophila melanogaster
4.0e-31
135.6
106
60.4
ENSG00000034713
Homo sapiens
4.0e-31
135.6
105
61.0
AT3G15580
Arabidopsis thaliana
5.4e-28
125.2
104
55.8
AT3G06420
Arabidopsis thaliana
6.0e-27
121.7
104
53.8
Naga_101558g1
Nannochloropsis gaditana
1.5e-25
117.1
80
72.5
ENSG00000139112
Homo sapiens
2.8e-24
112.8
86
60.5
ENSG00000197769
Homo sapiens
3.0e-18
92.8
105
44.8
emh493640
Emiliania huxleyi
7.3e-17
88.2
68
69.1
ENSG00000140941
Homo sapiens
1.4e-15
84.0
108
36.1
ENSG00000101460
Homo sapiens
9.0e-15
81.3
105
37.1
ENSG00000258102
Homo sapiens
1.5e-14
80.5
108
35.2
WBGene00002981
Caenorhabditis elegans
1.3e-13
77.4
108
33.3
pte243640
Paramecium tetraurelia
1.7e-13
77.0
98
38.8
pte478300
Paramecium tetraurelia
3.8e-13
75.9
106
35.8
pte488230
Paramecium tetraurelia
7.8e-11
68.2
110
36.4
pte70240
Paramecium tetraurelia
2.3e-10
66.6
107
36.4
pte341010
Paramecium tetraurelia
6.6e-10
65.1
106
36.8
pte49350
Paramecium tetraurelia
8.7e-10
64.7
116
37.1
pte767340
Paramecium tetraurelia
1.1e-09
64.3
111
29.7
pte739570
Paramecium tetraurelia
1.5e-09
63.9
106
30.2
pte205100
Paramecium tetraurelia
2.5e-09
63.2
101
35.6
pte742170
Paramecium tetraurelia
4.3e-09
62.4
108
30.6
pte770050
Paramecium tetraurelia
2.8e-08
59.7
106
31.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (9 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (11 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing