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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c19_17130
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c19_17130
Physcomitrella patens
0.0e+00
1663.3
818
100.0
AT3G20630
Arabidopsis thaliana
8.1e-312
1070.8
821
64.3
ENSG00000111667
Homo sapiens
7.0e-231
802.0
870
49.1
ENSG00000058056
Homo sapiens
1.0e-205
718.4
858
43.6
FBgn0035402
Drosophila melanogaster
5.8e-201
702.6
849
45.1
ccr105840
Chondrus crispus
5.7e-164
579.7
853
39.4
Cre02.g080350
Chlamydomonas reinhardtii
2.6e-145
517.7
947
34.0
Naga_100086g18
Nannochloropsis gaditana
3.8e-136
487.3
917
35.1
ptri197590
Phaeodactylum tricornutum
8.8e-133
476.1
876
36.1
tho66880
Thalassiosira oceanica
7.0e-130
466.5
872
34.6
emh700200
Emiliania huxleyi
1.1e-127
459.1
855
35.8
fso150670
Fistulifera solaris
1.6e-126
455.3
851
35.1
Sro50_g028940
Seminavis robusta
1.5e-124
448.7
879
34.0
CC00G02270
Cyclotella cryptica
2.6e-124
448.0
866
34.9
CC00G151470
Cyclotella cryptica
2.6e-124
448.0
866
34.9
SPBC6B1.06c
Schizosaccharomyces pombe
4.4e-124
447.2
822
34.3
fso156050
Fistulifera solaris
2.4e-122
441.4
847
34.5
tps168550
Thalassiosira pseudonana
1.5e-119
432.2
772
36.7
AA0005G03970
Aureococcus anophagefferens
9.4e-119
429.5
843
35.3
ps00G46980
Pseudo-nitzschia multiseries
4.0e-117
424.1
852
33.7
gene8079
Fragilariopsis cylindrus
1.2e-116
422.5
719
36.7
WBGene00020839
Caenorhabditis elegans
2.3e-112
408.3
827
32.0
Ec-15_000480
Ectocarpus siliculosus
5.2e-109
397.1
623
37.9
pte41080
Paramecium tetraurelia
8.6e-88
326.6
692
32.1
pte431210
Paramecium tetraurelia
8.6e-88
326.6
671
32.8
sya00G29320
Synedra acus
2.2e-75
285.4
599
31.9
YBR058C
Saccharomyces cerevisiae strain S288C
1.3e-70
269.6
660
30.0
CM20G00980
Cyanidioschyzon merolae
2.6e-68
261.9
787
29.1
sya00G10270
Synedra acus
4.8e-62
241.1
503
31.4
sya00G212090
Synedra acus
7.6e-60
233.8
485
31.5
PSNMU-V1.4_AUG-EV-PASAV3_0104140
Pseudo-nitzschia multistriata
1.0e-35
153.7
224
42.0
Pp3c21_16740
Physcomitrella patens
6.5e-35
151.0
190
49.5
ENSG00000140455
Homo sapiens
6.3e-14
81.3
442
21.5
CC00G152010
Cyclotella cryptica
2.7e-12
75.9
376
22.1
tps29250
Thalassiosira pseudonana
1.0e-11
73.9
344
22.7
Sro827_g207770
Seminavis robusta
4.7e-09
65.1
361
22.7
WBGene00019259
Caenorhabditis elegans
1.8e-08
63.2
139
29.5
ENSG00000138592
Homo sapiens
1.8e-08
63.2
310
24.5
fso37700
Fistulifera solaris
3.0e-08
62.4
314
21.3
fso17300
Fistulifera solaris
4.0e-08
62.0
330
21.2
gsu64760
Galdieria sulphuraria
4.0e-08
62.0
70
40.0
tho157000
Thalassiosira oceanica
5.2e-08
61.6
313
21.7
emh657470
Emiliania huxleyi
8.8e-08
60.8
48
50.0
ENSG00000162191
Homo sapiens
1.2e-07
60.5
66
45.5
ps00G70720
Pseudo-nitzschia multiseries
2.0e-07
59.7
342
23.7
gene1096
Fragilariopsis cylindrus
9.8e-07
57.4
284
20.1
gsu27810
Galdieria sulphuraria
9.8e-07
57.4
393
20.9
gene8952
Fragilariopsis cylindrus
1.7e-06
56.6
284
20.1
ptri189620
Phaeodactylum tricornutum
1.7e-06
56.6
310
20.6
gene1400
Fragilariopsis cylindrus
2.2e-06
56.2
369
23.8
PSNMU-V1.4_AUG-EV-PASAV3_0004000
Pseudo-nitzschia multistriata
2.8e-06
55.8
364
20.9
ccr44780
Chondrus crispus
3.7e-06
55.5
48
50.0
CM13G02850
Cyanidioschyzon merolae
4.8e-06
55.1
97
34.0
YJL197W
Saccharomyces cerevisiae strain S288C
4.8e-06
55.1
158
26.6
YMR223W
Saccharomyces cerevisiae strain S288C
4.8e-06
55.1
359
20.6
pte339780
Paramecium tetraurelia
8.3e-06
54.3
138
28.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing