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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c18_13030
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c18_13030
Physcomitrella patens
1.2e-308
1059.7
545
100.0
Pp3c21_6740
Physcomitrella patens
6.5e-225
781.6
545
71.6
Pp3c22_8620
Physcomitrella patens
9.8e-213
741.1
568
65.0
Pp3c19_21170
Physcomitrella patens
1.6e-210
733.8
570
64.4
Pp3c27_3390
Physcomitrella patens
8.8e-129
462.2
563
46.4
Pp3c1_32995
Physcomitrella patens
4.1e-126
453.4
542
46.9
Pp3c1_32990
Physcomitrella patens
4.1e-126
453.4
542
46.9
AT3G63240
Arabidopsis thaliana
1.1e-99
365.5
547
39.7
AT2G32010
Arabidopsis thaliana
4.2e-99
363.6
501
42.5
AT1G34120
Arabidopsis thaliana
7.5e-96
352.8
561
37.6
AT5G65090
Arabidopsis thaliana
9.8e-96
352.4
449
44.5
AT1G05470
Arabidopsis thaliana
1.2e-93
345.5
529
39.3
AT4G18010
Arabidopsis thaliana
1.5e-91
338.6
550
36.2
AT2G37440
Arabidopsis thaliana
4.7e-90
333.6
541
39.0
AT5G04980
Arabidopsis thaliana
9.8e-88
325.9
436
42.7
AT1G71710
Arabidopsis thaliana
1.3e-87
325.5
543
36.8
AT2G01900
Arabidopsis thaliana
2.0e-80
301.6
461
37.1
gsu65700
Galdieria sulphuraria
5.6e-43
177.2
257
38.5
ENSG00000122126
Homo sapiens
8.1e-42
173.3
292
36.3
ENSG00000078269
Homo sapiens
1.7e-39
165.6
352
32.1
ENSG00000204084
Homo sapiens
2.9e-39
164.9
283
36.0
ENSG00000159082
Homo sapiens
4.9e-39
164.1
277
34.7
Cre07.g352400
Chlamydomonas reinhardtii
1.4e-38
162.5
390
30.8
CM04G00800
Cyanidioschyzon merolae
2.4e-38
161.8
263
34.6
tho09120
Thalassiosira oceanica
1.8e-36
155.6
275
33.5
fso110980
Fistulifera solaris
3.0e-36
154.8
265
38.5
tps96360
Thalassiosira pseudonana
3.9e-36
154.5
275
33.1
fso01860
Fistulifera solaris
5.1e-36
154.1
265
38.5
CC00G108390
Cyclotella cryptica
1.9e-35
152.1
275
33.8
YOR109W
Saccharomyces cerevisiae strain S288C
7.4e-35
150.2
243
37.0
FBgn0034691
Drosophila melanogaster
2.8e-34
148.3
257
34.2
ps00G134480
Pseudo-nitzschia multiseries
4.8e-34
147.5
280
34.3
AT1G65580
Arabidopsis thaliana
1.1e-33
146.4
304
34.5
YNL106C
Saccharomyces cerevisiae strain S288C
1.4e-33
146.0
241
39.4
WBGene00006763
Caenorhabditis elegans
4.0e-33
144.4
244
36.9
Sro1631_g287220
Seminavis robusta
1.5e-32
142.5
276
31.9
ptri207600
Phaeodactylum tricornutum
2.0e-32
142.1
259
35.5
PSNMU-V1.4_AUG-EV-PASAV3_0035030
Pseudo-nitzschia multistriata
2.6e-32
141.7
267
35.2
YIL002C
Saccharomyces cerevisiae strain S288C
3.4e-32
141.4
244
35.7
gene8165
Fragilariopsis cylindrus
1.0e-31
139.8
257
36.6
FBgn0023508
Drosophila melanogaster
1.3e-31
139.4
242
35.5
SPBC577.13
Schizosaccharomyces pombe
1.3e-31
139.4
268
34.0
Naga_100007g108
Nannochloropsis gaditana
2.9e-31
138.3
300
32.0
emh105190
Emiliania huxleyi
4.9e-31
137.5
251
36.3
sya00G15890
Synedra acus
1.9e-30
135.6
276
33.3
AT2G43900
Arabidopsis thaliana
4.2e-30
134.4
276
30.4
SPAC9G1.10c
Schizosaccharomyces pombe
2.3e-28
128.6
261
32.2
emh746130
Emiliania huxleyi
5.1e-28
127.5
203
37.4
SPBC2G2.02
Schizosaccharomyces pombe
6.7e-28
127.1
256
33.2
AT2G31830
Arabidopsis thaliana
1.5e-27
125.9
307
29.3
emh741740
Emiliania huxleyi
4.3e-27
124.4
230
34.8
ENSG00000165458
Homo sapiens
1.3e-26
122.9
239
34.3
Pp3c16_2270
Physcomitrella patens
1.3e-26
122.9
281
29.5
AT1G05630
Arabidopsis thaliana
2.1e-26
122.1
352
28.4
FBgn0034179
Drosophila melanogaster
6.3e-26
120.6
254
32.3
Ec-26_000170
Ectocarpus siliculosus
1.4e-25
119.4
262
32.1
Pp3c17_16770
Physcomitrella patens
1.4e-25
119.4
258
31.0
ccr144180
Chondrus crispus
1.8e-25
119.0
224
33.5
WBGene00007620
Caenorhabditis elegans
4.1e-25
117.9
256
33.2
emh230600
Emiliania huxleyi
9.0e-25
116.7
273
34.1
ENSG00000168918
Homo sapiens
1.2e-24
116.3
235
36.2
ENSG00000281614
Homo sapiens
1.2e-24
116.3
235
36.2
Pp3c2_9260
Physcomitrella patens
1.3e-23
112.8
254
30.7
Pp3c1_31610
Physcomitrella patens
1.3e-23
112.8
257
30.0
emh168010
Emiliania huxleyi
1.1e-22
109.8
231
32.9
pte466450
Paramecium tetraurelia
1.1e-22
109.8
259
29.7
ccr40360
Chondrus crispus
1.9e-22
109.0
324
28.4
ccr45360
Chondrus crispus
3.2e-22
108.2
264
29.9
ENSG00000148384
Homo sapiens
4.2e-22
107.8
251
31.5
tps215610
Thalassiosira pseudonana
4.2e-22
107.8
244
32.4
Pp3c21_20640
Physcomitrella patens
7.2e-22
107.1
251
30.7
CC00G123270
Cyclotella cryptica
1.2e-21
106.3
434
26.3
pte586100
Paramecium tetraurelia
1.2e-21
106.3
259
29.7
fso62760
Fistulifera solaris
2.1e-21
105.5
259
33.2
fso98070
Fistulifera solaris
6.1e-21
104.0
258
32.6
ps00G104910
Pseudo-nitzschia multiseries
6.1e-21
104.0
263
30.0
pte549610
Paramecium tetraurelia
6.1e-21
104.0
261
27.2
ENSG00000185133
Homo sapiens
1.0e-20
103.2
250
27.6
emh607630
Emiliania huxleyi
2.3e-20
102.1
254
33.1
PSNMU-V1.4_AUG-EV-PASAV3_0076400
Pseudo-nitzschia multistriata
6.7e-20
100.5
302
29.5
Pp3c18_1400
Physcomitrella patens
1.1e-19
99.8
251
29.5
Naga_100058g10
Nannochloropsis gaditana
1.5e-19
99.4
290
30.3
WBGene00012016
Caenorhabditis elegans
1.9e-19
99.0
237
28.3
ptri174050
Phaeodactylum tricornutum
4.3e-19
97.8
395
26.1
sya00G107600
Synedra acus
7.4e-19
97.1
348
28.7
tho181820
Thalassiosira oceanica
9.7e-19
96.7
264
30.7
Ec-09_000920
Ectocarpus siliculosus
4.8e-18
94.4
169
36.1
Sro1296_g260340
Seminavis robusta
6.3e-18
94.0
413
26.4
pte701430
Paramecium tetraurelia
8.2e-18
93.6
256
26.6
Cre13.g563550
Chlamydomonas reinhardtii
1.4e-17
92.8
251
28.7
AT1G47510
Arabidopsis thaliana
4.1e-17
91.3
205
32.7
pte557850
Paramecium tetraurelia
5.3e-17
90.9
257
28.8
ENSG00000132376
Homo sapiens
2.6e-16
88.6
257
26.1
pte735150
Paramecium tetraurelia
3.4e-16
88.2
260
26.9
pte393890
Paramecium tetraurelia
4.5e-16
87.8
255
26.3
Ec-11_006280
Ectocarpus siliculosus
5.9e-16
87.4
142
34.5
FBgn0036273
Drosophila melanogaster
7.7e-16
87.0
195
31.3
AA0012G02080
Aureococcus anophagefferens
1.0e-15
86.7
137
39.4
Cre11.g467546
Chlamydomonas reinhardtii
1.0e-15
86.7
136
38.2
pte241180
Paramecium tetraurelia
3.8e-15
84.7
257
27.6
Cre12.g530050
Chlamydomonas reinhardtii
3.6e-13
78.2
296
24.3
WBGene00086546
Caenorhabditis elegans
4.6e-13
77.8
199
31.7
pte441160
Paramecium tetraurelia
1.4e-12
76.3
265
23.0
AA0013G01530
Aureococcus anophagefferens
1.8e-12
75.9
125
40.0
sya00G43140
Synedra acus
5.1e-12
74.3
157
29.9
AA0028G00150
Aureococcus anophagefferens
3.3e-11
71.6
295
25.8
gene16274
Fragilariopsis cylindrus
7.4e-11
70.5
210
28.1
ccr123620
Chondrus crispus
1.3e-10
69.7
141
30.5
CC00G52380
Cyclotella cryptica
4.8e-10
67.8
223
24.2
tps73790
Thalassiosira pseudonana
6.3e-10
67.4
354
22.6
gene6356
Fragilariopsis cylindrus
3.1e-09
65.1
95
42.1
AA0001G01310
Aureococcus anophagefferens
1.3e-07
59.7
90
38.9
AA0003G01940
Aureococcus anophagefferens
1.4e-06
56.2
122
33.6
AA0007G00400
Aureococcus anophagefferens
3.2e-06
55.1
77
36.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (6 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (10 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (4 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (15 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (4 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (9 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (13 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing