Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c15_4580
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c15_4580
Physcomitrella patens
2.8e-197
689.1
341
100.0
ccr162020
Chondrus crispus
4.9e-29
130.2
417
26.1
Pp3c7_15950
Physcomitrella patens
4.2e-28
127.1
431
27.4
ccr162420
Chondrus crispus
7.1e-28
126.3
417
25.7
ccr12560
Chondrus crispus
2.7e-27
124.4
333
30.0
Naga_100497g3
Nannochloropsis gaditana
1.3e-26
122.1
415
25.5
Naga_100252g2
Nannochloropsis gaditana
1.8e-26
121.7
405
26.2
Naga_101065g1
Nannochloropsis gaditana
3.9e-26
120.6
405
25.7
Pp3c23_8160
Physcomitrella patens
8.7e-26
119.4
361
27.7
Pp3c11_12670
Physcomitrella patens
1.9e-25
118.2
343
28.6
Naga_101146g2
Nannochloropsis gaditana
2.5e-25
117.9
396
26.5
Naga_100433g2
Nannochloropsis gaditana
7.4e-25
116.3
386
26.2
ccr162000
Chondrus crispus
1.6e-24
115.2
338
28.1
Naga_101002g3
Nannochloropsis gaditana
2.8e-24
114.4
405
25.7
AT4G23160
Arabidopsis thaliana
1.4e-23
112.1
333
24.6
Naga_100549g4
Nannochloropsis gaditana
1.8e-23
111.7
392
25.3
Pp3c19_10880
Physcomitrella patens
2.9e-21
104.4
415
25.1
Naga_100055g1
Nannochloropsis gaditana
6.5e-21
103.2
339
26.8
ccr12580
Chondrus crispus
3.2e-20
100.9
366
27.3
Naga_101142g1
Nannochloropsis gaditana
5.5e-20
100.1
384
25.0
ccr12540
Chondrus crispus
9.3e-20
99.4
385
25.7
Pp3c23_13580
Physcomitrella patens
1.6e-19
98.6
155
33.5
Pp3c11_9140
Physcomitrella patens
2.7e-19
97.8
272
27.9
Pp3c18_14670
Physcomitrella patens
1.3e-18
95.5
229
27.1
Pp3c3_18720
Physcomitrella patens
2.3e-18
94.7
154
40.9
ccr12660
Chondrus crispus
3.0e-18
94.4
417
23.5
Pp3c4_7430
Physcomitrella patens
6.7e-18
93.2
320
27.2
Pp3c26_14020
Physcomitrella patens
1.1e-17
92.4
222
27.9
Pp3c22_17610
Physcomitrella patens
1.9e-17
91.7
141
36.9
Naga_100167g13
Nannochloropsis gaditana
3.3e-17
90.9
274
27.4
ccr12600
Chondrus crispus
4.3e-17
90.5
366
27.0
Pp3c14_23500
Physcomitrella patens
4.3e-17
90.5
277
27.4
Pp3c18_10510
Physcomitrella patens
7.4e-17
89.7
176
33.0
Pp3c15_8400
Physcomitrella patens
1.6e-16
88.6
276
26.1
Pp3c21_14170
Physcomitrella patens
4.8e-16
87.0
164
31.7
Ec-05_005370
Ectocarpus siliculosus
6.3e-16
86.7
413
24.5
Ec-12_008930
Ectocarpus siliculosus
6.3e-16
86.7
413
24.5
Pp3c23_22280
Physcomitrella patens
2.4e-15
84.7
267
26.6
ccr33040
Chondrus crispus
4.1e-15
84.0
397
22.7
Naga_100294g11
Nannochloropsis gaditana
1.2e-14
82.4
129
35.7
Pp3c13_150
Physcomitrella patens
1.2e-14
82.4
174
28.2
Pp3c23_17680
Physcomitrella patens
1.2e-14
82.4
91
42.9
ccr187100
Chondrus crispus
2.0e-14
81.6
203
26.6
Pp3c18_3680
Physcomitrella patens
2.0e-14
81.6
314
26.4
Pp3c6_18150
Physcomitrella patens
2.0e-14
81.6
313
25.2
Pp3c1_34910
Physcomitrella patens
4.5e-14
80.5
141
34.0
Ec-07_000280
Ectocarpus siliculosus
5.9e-14
80.1
408
23.3
ccr185520
Chondrus crispus
7.7e-14
79.7
173
31.2
ccr52380
Chondrus crispus
1.7e-13
78.6
176
30.1
fso63650
Fistulifera solaris
1.7e-13
78.6
335
23.3
ccr12640
Chondrus crispus
2.9e-13
77.8
145
33.1
Ec-21_000440
Ectocarpus siliculosus
2.9e-13
77.8
409
22.5
Naga_101948g1
Nannochloropsis gaditana
2.9e-13
77.8
143
32.9
Pp3c23_1320
Physcomitrella patens
5.0e-13
77.0
420
22.4
Cre16.g673450
Chlamydomonas reinhardtii
1.4e-12
75.5
206
26.7
Pp3c8_15150
Physcomitrella patens
1.4e-12
75.5
294
20.7
ccr97560
Chondrus crispus
1.9e-12
75.1
173
28.9
Cre03.g186800
Chlamydomonas reinhardtii
1.9e-12
75.1
206
26.7
Cre01.g045850
Chlamydomonas reinhardtii
1.9e-12
75.1
206
26.2
fso79470
Fistulifera solaris
1.9e-12
75.1
406
21.4
CC00G45280
Cyclotella cryptica
2.5e-12
74.7
295
23.4
fso200820
Fistulifera solaris
2.5e-12
74.7
405
21.2
Cre03.g183950
Chlamydomonas reinhardtii
3.2e-12
74.3
206
26.2
Pp3c15_13080
Physcomitrella patens
3.2e-12
74.3
179
27.4
ccr46400
Chondrus crispus
5.5e-12
73.6
101
37.6
tho20420
Thalassiosira oceanica
5.5e-12
73.6
322
25.8
fso200830
Fistulifera solaris
7.2e-12
73.2
381
22.3
Pp3c2_13210
Physcomitrella patens
9.4e-12
72.8
224
26.3
ATMG00810
Arabidopsis thaliana
1.2e-11
72.4
223
24.7
ccr77380
Chondrus crispus
1.6e-11
72.0
176
27.8
tho64380
Thalassiosira oceanica
1.6e-11
72.0
419
25.5
tho94400
Thalassiosira oceanica
1.6e-11
72.0
319
27.9
sya00G45490
Synedra acus
2.1e-11
71.6
327
22.9
sya00G236680
Synedra acus
2.1e-11
71.6
327
22.9
sya00G247220
Synedra acus
2.1e-11
71.6
327
22.9
Naga_100336g4
Nannochloropsis gaditana
2.7e-11
71.2
109
37.6
ccr158720
Chondrus crispus
3.6e-11
70.9
101
36.6
tho338540
Thalassiosira oceanica
3.6e-11
70.9
352
25.3
Naga_100235g1
Nannochloropsis gaditana
4.6e-11
70.5
192
26.0
Pp3c1_38590
Physcomitrella patens
4.6e-11
70.5
203
30.0
ccr170160
Chondrus crispus
6.1e-11
70.1
101
37.6
Naga_100999g3
Nannochloropsis gaditana
6.1e-11
70.1
171
28.1
Pp3c22_19380
Physcomitrella patens
6.1e-11
70.1
236
28.8
Pp3c5_17950
Physcomitrella patens
6.1e-11
70.1
76
38.2
Naga_100252g7
Nannochloropsis gaditana
7.9e-11
69.7
113
35.4
tho86000
Thalassiosira oceanica
7.9e-11
69.7
323
20.7
ccr121940
Chondrus crispus
1.0e-10
69.3
93
38.7
fso06610
Fistulifera solaris
1.0e-10
69.3
344
22.1
Pp3c1_13760
Physcomitrella patens
1.0e-10
69.3
179
29.1
tho293920
Thalassiosira oceanica
1.0e-10
69.3
351
24.5
Naga_100417g4
Nannochloropsis gaditana
1.4e-10
68.9
109
37.6
Pp3c9_20430
Physcomitrella patens
1.8e-10
68.6
329
22.8
tho56660
Thalassiosira oceanica
1.8e-10
68.6
347
24.8
CC00G100660
Cyclotella cryptica
2.3e-10
68.2
322
24.2
fso11860
Fistulifera solaris
2.3e-10
68.2
344
22.1
tho197380
Thalassiosira oceanica
2.3e-10
68.2
431
23.7
tho105160
Thalassiosira oceanica
5.1e-10
67.0
334
26.0
Pp3c14_19920
Physcomitrella patens
6.7e-10
66.6
149
28.9
Naga_100294g4
Nannochloropsis gaditana
1.1e-09
65.9
171
26.9
Naga_100533g2
Nannochloropsis gaditana
1.1e-09
65.9
102
35.3
Pp3c3_35870
Physcomitrella patens
2.0e-09
65.1
68
42.6
Pp3c7_3400
Physcomitrella patens
5.7e-09
63.5
76
42.1
sya00G59300
Synedra acus
5.7e-09
63.5
111
36.0
ccr30000
Chondrus crispus
9.7e-09
62.8
146
29.5
Pp3c2_13360
Physcomitrella patens
9.7e-09
62.8
89
37.1
Pp3c22_5160
Physcomitrella patens
1.3e-08
62.4
200
27.0
sya00G238580
Synedra acus
1.3e-08
62.4
111
34.2
tho329240
Thalassiosira oceanica
2.2e-08
61.6
134
28.4
fso181140
Fistulifera solaris
3.7e-08
60.8
196
25.0
YHL009W-B
Saccharomyces cerevisiae strain S288C
3.7e-08
60.8
113
30.1
YJL113W
Saccharomyces cerevisiae strain S288C
3.7e-08
60.8
113
30.1
fso121990
Fistulifera solaris
4.8e-08
60.5
373
19.8
Naga_100748g1
Nannochloropsis gaditana
6.3e-08
60.1
86
37.2
CC00G06130
Cyclotella cryptica
8.2e-08
59.7
312
24.0
CC00G141300
Cyclotella cryptica
8.2e-08
59.7
123
33.3
sya00G35570
Synedra acus
1.1e-07
59.3
335
23.0
Pp3c1_29930
Physcomitrella patens
3.1e-07
57.8
220
24.5
sya00G60910
Synedra acus
3.1e-07
57.8
107
36.4
tho83920
Thalassiosira oceanica
3.1e-07
57.8
110
37.3
tho16720
Thalassiosira oceanica
4.1e-07
57.4
110
37.3
ccr58100
Chondrus crispus
5.3e-07
57.0
160
24.4
CC00G30360
Cyclotella cryptica
5.3e-07
57.0
154
29.2
tho219020
Thalassiosira oceanica
5.3e-07
57.0
109
29.4
sya00G57360
Synedra acus
9.1e-07
56.2
111
32.4
tho131480
Thalassiosira oceanica
9.1e-07
56.2
161
33.5
tho385140
Thalassiosira oceanica
9.1e-07
56.2
110
38.2
ccr143000
Chondrus crispus
1.2e-06
55.8
92
31.5
sya00G179360
Synedra acus
1.2e-06
55.8
89
37.1
tho89820
Thalassiosira oceanica
1.2e-06
55.8
108
25.9
ccr173000
Chondrus crispus
1.5e-06
55.5
144
28.5
Pp3c19_10910
Physcomitrella patens
1.5e-06
55.5
95
31.6
sya00G170370
Synedra acus
1.5e-06
55.5
108
26.9
tho99520
Thalassiosira oceanica
1.5e-06
55.5
285
27.0
Ec-03_001760
Ectocarpus siliculosus
2.0e-06
55.1
170
26.5
sya00G59780
Synedra acus
2.0e-06
55.1
257
24.1
Naga_100294g5
Nannochloropsis gaditana
2.6e-06
54.7
86
37.2
Pp3c4_10620
Physcomitrella patens
2.6e-06
54.7
77
33.8
fso120110
Fistulifera solaris
3.4e-06
54.3
161
27.3
Naga_100294g10
Nannochloropsis gaditana
3.4e-06
54.3
108
29.6
sya00G266280
Synedra acus
7.7e-06
53.1
315
22.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (17 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (9 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (5 genes)
Nannochloropsis gaditana (22 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (23 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (12 genes)
Physcomitrella patens (39 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing