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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c15_3560
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c15_3560
Physcomitrella patens
0.0e+00
3498.8
1740
100.0
Pp3c9_4700
Physcomitrella patens
0.0e+00
2340.1
1748
68.4
Pp3c17_2850
Physcomitrella patens
0.0e+00
1991.1
1747
60.2
Pp3c7_22570
Physcomitrella patens
1.6e-288
994.6
1699
39.8
Pp3c2_29090
Physcomitrella patens
1.7e-287
991.1
1785
37.5
gsu119960
Galdieria sulphuraria
6.2e-51
205.3
1313
21.8
AT5G02310
Arabidopsis thaliana
5.4e-47
192.2
2069
21.2
Pp3c10_20380
Physcomitrella patens
6.8e-42
175.3
2167
20.0
ENSG00000159459
Homo sapiens
5.8e-41
172.2
1219
21.6
ENSG00000144357
Homo sapiens
2.2e-40
170.2
1969
20.2
Pp3c3_24510
Physcomitrella patens
3.2e-39
166.4
2147
20.4
Pp3c3_37220
Physcomitrella patens
6.8e-34
148.7
919
22.4
Pp3c8_2940
Physcomitrella patens
1.5e-33
147.5
946
22.3
Pp3c8_2930
Physcomitrella patens
1.5e-33
147.5
946
22.3
ENSG00000024048
Homo sapiens
1.7e-29
134.0
1905
20.9
SPBC19C7.02
Schizosaccharomyces pombe
3.8e-24
116.3
1388
21.0
ccr96920
Chondrus crispus
6.6e-21
105.5
282
29.1
Cre02.g089237
Chlamydomonas reinhardtii
3.3e-20
103.2
88
52.3
SPAC15A10.11
Schizosaccharomyces pombe
1.1e-18
98.2
1428
19.5
emh641100
Emiliania huxleyi
4.9e-16
89.4
142
38.0
emh202550
Emiliania huxleyi
7.1e-15
85.5
68
52.9
emh05340
Emiliania huxleyi
7.1e-15
85.5
68
52.9
fso50450
Fistulifera solaris
1.6e-14
84.3
107
36.4
ptri25880
Phaeodactylum tricornutum
1.6e-14
84.3
92
40.2
fso117180
Fistulifera solaris
6.0e-14
82.4
107
35.5
sya00G187300
Synedra acus
6.0e-14
82.4
75
44.0
CC00G17000
Cyclotella cryptica
7.9e-14
82.0
88
38.6
ps00G39060
Pseudo-nitzschia multiseries
1.8e-13
80.9
71
43.7
Sro430_g141370
Seminavis robusta
1.8e-13
80.9
121
32.2
ptri97370
Phaeodactylum tricornutum
5.1e-13
79.3
69
42.0
gene16175
Fragilariopsis cylindrus
6.7e-13
79.0
75
37.3
gene4450
Fragilariopsis cylindrus
6.7e-13
79.0
75
37.3
Sro1087_g239810
Seminavis robusta
6.7e-13
79.0
137
30.7
tps162180
Thalassiosira pseudonana
6.7e-13
79.0
68
41.2
PSNMU-V1.4_AUG-EV-PASAV3_0044840
Pseudo-nitzschia multistriata
8.7e-13
78.6
75
37.3
fso22080
Fistulifera solaris
1.1e-12
78.2
117
33.3
tps205130
Thalassiosira pseudonana
1.1e-12
78.2
68
42.6
ps00G146680
Pseudo-nitzschia multiseries
1.5e-12
77.8
75
37.3
fso131290
Fistulifera solaris
4.3e-12
76.3
68
41.2
gene6541
Fragilariopsis cylindrus
5.6e-12
75.9
99
37.4
Ec-11_002810
Ectocarpus siliculosus
7.4e-12
75.5
79
38.0
WBGene00017373
Caenorhabditis elegans
9.6e-12
75.1
113
32.7
Sro397_g134430
Seminavis robusta
1.6e-11
74.3
60
45.0
Naga_100023g38
Nannochloropsis gaditana
6.2e-11
72.4
68
38.2
tho145400
Thalassiosira oceanica
1.4e-10
71.2
107
32.7
Naga_100073g7
Nannochloropsis gaditana
4.0e-10
69.7
68
35.3
sya00G61890
Synedra acus
6.9e-10
68.9
99
35.4
sya00G144450
Synedra acus
6.9e-10
68.9
99
35.4
WBGene00016326
Caenorhabditis elegans
3.4e-09
66.6
140
27.1
emh55720
Emiliania huxleyi
5.8e-09
65.9
68
44.1
FBgn0030809
Drosophila melanogaster
1.0e-08
65.1
121
34.7
CC00G109250
Cyclotella cryptica
1.7e-08
64.3
54
40.7
emh485450
Emiliania huxleyi
2.2e-08
63.9
110
33.6
Sro397_g134410
Seminavis robusta
3.8e-08
63.2
71
38.0
pte191380
Paramecium tetraurelia
9.3e-07
58.5
246
22.0
Ec-21_002440
Ectocarpus siliculosus
4.6e-06
56.2
171
28.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (4 genes)
Synedra acus (3 genes)
Physcomitrella patens (10 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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