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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c14_3370
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c14_3370
Physcomitrella patens
0.0e+00
2051.6
1048
100.0
AT3G16260
Arabidopsis thaliana
2.4e-223
777.3
908
47.8
AT1G52160
Arabidopsis thaliana
9.6e-217
755.4
926
45.7
ccr189680
Chondrus crispus
7.2e-87
323.9
902
29.8
Cre01.g039900
Chlamydomonas reinhardtii
5.7e-84
314.3
990
29.5
gsu93490
Galdieria sulphuraria
2.8e-83
312.0
903
29.2
AA0006G00260
Aureococcus anophagefferens
5.9e-81
304.3
953
29.0
ENSG00000006744
Homo sapiens
1.0e-80
303.5
963
27.7
FBgn0028426
Drosophila melanogaster
3.7e-67
258.5
974
26.0
CM15G01920
Cyanidioschyzon merolae
4.5e-65
251.5
897
27.0
SPAC1D4.10
Schizosaccharomyces pombe
8.3e-59
230.7
973
24.7
fso16200
Fistulifera solaris
9.4e-55
217.2
916
25.3
ps00G50740
Pseudo-nitzschia multiseries
4.0e-53
211.8
959
24.1
tps125400
Thalassiosira pseudonana
1.5e-52
209.9
984
23.5
tho157300
Thalassiosira oceanica
1.7e-51
206.5
962
24.4
CC00G115500
Cyclotella cryptica
3.7e-51
205.3
977
23.5
fso117810
Fistulifera solaris
7.0e-50
201.1
917
24.6
ptri102940
Phaeodactylum tricornutum
1.9e-47
193.0
937
24.1
gene17597
Fragilariopsis cylindrus
2.1e-46
189.5
934
23.6
Sro394_g133750
Seminavis robusta
1.0e-45
187.2
947
23.7
gene6945
Fragilariopsis cylindrus
4.0e-45
185.3
934
23.6
Pp3c18_12540
Physcomitrella patens
2.6e-44
182.6
386
32.4
sya00G196150
Synedra acus
1.0e-40
170.6
411
30.4
Naga_100006g39
Nannochloropsis gaditana
2.3e-40
169.5
353
32.9
YKR079C
Saccharomyces cerevisiae strain S288C
3.9e-40
168.7
917
22.0
Cre16.g680678
Chlamydomonas reinhardtii
4.3e-39
165.2
495
29.5
WBGene00001983
Caenorhabditis elegans
9.8e-36
154.1
382
29.1
pte251970
Paramecium tetraurelia
8.9e-29
131.0
824
21.6
pte793970
Paramecium tetraurelia
1.9e-26
123.2
390
27.7
emh702860
Emiliania huxleyi
1.6e-22
110.2
133
48.9
SPBC3D6.03c
Schizosaccharomyces pombe
6.8e-21
104.8
320
27.2
emh508670
Emiliania huxleyi
1.2e-20
104.0
155
43.2
ptri241220
Phaeodactylum tricornutum
1.9e-18
96.7
365
26.0
CC00G66440
Cyclotella cryptica
1.6e-14
83.6
384
24.7
ENSG00000141642
Homo sapiens
6.2e-14
81.6
377
25.7
AA0003G04030
Aureococcus anophagefferens
1.1e-13
80.9
331
26.9
emh162200
Emiliania huxleyi
1.1e-13
80.9
423
23.9
tho170780
Thalassiosira oceanica
5.2e-13
78.6
364
24.7
Sro897_g217470
Seminavis robusta
9.9e-12
74.3
334
26.3
AA0017G01380
Aureococcus anophagefferens
1.7e-11
73.6
345
26.7
pte637660
Paramecium tetraurelia
1.7e-11
73.6
345
25.2
sya00G228090
Synedra acus
1.7e-11
73.6
435
26.2
AA0002G01240
Aureococcus anophagefferens
8.4e-11
71.2
380
24.7
Pp3s169_60
Physcomitrella patens
5.4e-10
68.6
77
44.2
fso134120
Fistulifera solaris
9.3e-10
67.8
305
25.2
emh215440
Emiliania huxleyi
4.6e-09
65.5
119
34.5
ptri160130
Phaeodactylum tricornutum
1.1e-07
60.8
288
27.4
Cre12.g492250
Chlamydomonas reinhardtii
1.5e-07
60.5
102
34.3
gene5955
Fragilariopsis cylindrus
1.5e-07
60.5
343
23.6
gene5005
Fragilariopsis cylindrus
1.5e-07
60.5
343
25.1
PSNMU-V1.4_AUG-EV-PASAV3_0055980
Pseudo-nitzschia multistriata
3.3e-07
59.3
342
24.6
ps00G116540
Pseudo-nitzschia multiseries
5.6e-07
58.5
135
31.1
fso159020
Fistulifera solaris
2.1e-06
56.6
141
29.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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