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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c14_26870
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c14_26870
Physcomitrella patens
5.4e-268
924.5
472
100.0
AT2G40190
Arabidopsis thaliana
3.0e-149
530.0
434
60.8
ENSG00000253710
Homo sapiens
8.4e-104
379.0
429
46.2
Cre01.g058521
Chlamydomonas reinhardtii
8.5e-96
352.4
525
41.9
FBgn0037108
Drosophila melanogaster
7.2e-95
349.4
428
45.1
Naga_100210g2
Nannochloropsis gaditana
1.6e-86
321.6
499
39.5
tps30870
Thalassiosira pseudonana
1.0e-85
318.9
443
42.0
Ec-04_002960
Ectocarpus siliculosus
1.3e-83
312.0
426
44.4
sya00G78940
Synedra acus
4.1e-82
307.0
448
41.7
tho40400
Thalassiosira oceanica
2.6e-81
304.3
471
40.3
gsu48660
Galdieria sulphuraria
3.5e-81
303.9
429
40.1
WBGene00015162
Caenorhabditis elegans
1.3e-80
302.0
451
38.8
SPCC330.08
Schizosaccharomyces pombe
1.1e-79
298.9
456
40.1
CC00G31780
Cyclotella cryptica
2.3e-77
291.2
457
39.6
AA0005G01180
Aureococcus anophagefferens
6.7e-77
289.7
423
43.7
Sro98_g050430
Seminavis robusta
3.2e-71
270.8
432
38.7
ptri107000
Phaeodactylum tricornutum
7.0e-66
253.1
405
39.0
ccr30260
Chondrus crispus
1.0e-64
249.2
470
35.3
pte172290
Paramecium tetraurelia
4.2e-63
243.8
462
32.7
gene14795
Fragilariopsis cylindrus
1.6e-57
225.3
487
32.4
ps00G29310
Pseudo-nitzschia multiseries
1.0e-56
222.6
477
34.2
YNL048W
Saccharomyces cerevisiae strain S288C
6.6e-56
219.9
373
37.0
PSNMU-V1.4_AUG-EV-PASAV3_0030280
Pseudo-nitzschia multistriata
1.1e-55
219.2
532
32.9
fso94960
Fistulifera solaris
2.3e-48
194.9
349
37.8
CM09G03010
Cyanidioschyzon merolae
2.0e-36
155.2
516
30.0
emh321650
Emiliania huxleyi
6.0e-33
143.7
205
41.0
emh355880
Emiliania huxleyi
8.6e-32
139.8
203
39.4
sya00G78950
Synedra acus
8.9e-21
103.2
122
48.4
pte443810
Paramecium tetraurelia
1.7e-11
72.4
201
32.3
Ec-03_004420
Ectocarpus siliculosus
3.8e-11
71.2
226
33.2
gsu17350
Galdieria sulphuraria
1.9e-10
68.9
373
25.7
ccr138580
Chondrus crispus
7.1e-10
67.0
394
26.6
CM20G01680
Cyanidioschyzon merolae
3.5e-09
64.7
266
27.1
Naga_100035g28
Nannochloropsis gaditana
4.6e-09
64.3
163
35.6
sya00G141530
Synedra acus
1.8e-08
62.4
211
26.5
AT1G78800
Arabidopsis thaliana
3.9e-08
61.2
234
29.1
fso04660
Fistulifera solaris
4.3e-07
57.8
268
26.9
gene10837
Fragilariopsis cylindrus
5.6e-07
57.4
437
21.7
fso103720
Fistulifera solaris
5.6e-07
57.4
240
29.6
Pp3c12_4340
Physcomitrella patens
1.3e-06
56.2
199
28.6
Sro184_g079890
Seminavis robusta
3.7e-06
54.7
357
24.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (3 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing