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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c11_8940
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c11_8940
Physcomitrella patens
2.1e-55
216.1
107
100.0
Pp3c6_10360
Physcomitrella patens
4.1e-46
185.3
108
86.1
AT4G26840
Arabidopsis thaliana
1.4e-35
150.2
90
82.2
AT5G55160
Arabidopsis thaliana
2.8e-31
136.0
104
69.2
SPBC365.06
Schizosaccharomyces pombe
1.2e-21
104.0
95
54.7
pte527500
Paramecium tetraurelia
1.5e-19
97.1
78
53.8
pte465000
Paramecium tetraurelia
1.9e-19
96.7
78
53.8
pte543030
Paramecium tetraurelia
1.9e-19
96.7
78
53.8
pte651690
Paramecium tetraurelia
1.9e-19
96.7
78
53.8
pte266010
Paramecium tetraurelia
3.2e-19
95.9
77
54.5
CM05G00040
Cyanidioschyzon merolae
1.6e-18
93.6
92
53.3
Cre16.g675637
Chlamydomonas reinhardtii
8.0e-18
91.3
90
46.7
Cre16.g675861
Chlamydomonas reinhardtii
8.0e-18
91.3
99
47.5
FBgn0264922
Drosophila melanogaster
1.8e-17
90.1
89
51.7
AT5G55170
Arabidopsis thaliana
4.0e-17
89.0
97
50.5
Cre16.g675749
Chlamydomonas reinhardtii
4.0e-17
89.0
82
48.8
ENSG00000188612
Homo sapiens
6.8e-17
88.2
91
49.5
AT5G55856
Arabidopsis thaliana
8.8e-17
87.8
89
51.7
tho25240
Thalassiosira oceanica
7.5e-16
84.7
77
48.1
CC00G68810
Cyclotella cryptica
9.8e-16
84.3
90
41.1
CC00G84330
Cyclotella cryptica
2.2e-15
83.2
89
40.4
CC00G166550
Cyclotella cryptica
2.2e-15
83.2
89
40.4
emh685980
Emiliania huxleyi
2.8e-15
82.8
75
53.3
PSNMU-V1.4_AUG-EV-PASAV3_0089550
Pseudo-nitzschia multistriata
3.7e-15
82.4
88
44.3
ps00G153780
Pseudo-nitzschia multiseries
3.7e-15
82.4
88
44.3
AA0002G03330
Aureococcus anophagefferens
4.8e-15
82.0
91
42.9
emh467600
Emiliania huxleyi
6.3e-15
81.6
75
46.7
YDR510W
Saccharomyces cerevisiae strain S288C
8.3e-15
81.3
78
51.3
AA0003G00080
Aureococcus anophagefferens
2.4e-14
79.7
75
42.7
AA1410G00010
Aureococcus anophagefferens
2.4e-14
79.7
75
42.7
ptri132030
Phaeodactylum tricornutum
4.1e-14
79.0
78
43.6
Sro569_g168310
Seminavis robusta
4.1e-14
79.0
88
44.3
AT2G32765
Arabidopsis thaliana
5.4e-14
78.6
103
36.9
CC00G115730
Cyclotella cryptica
5.4e-14
78.6
100
38.0
fso43250
Fistulifera solaris
5.4e-14
78.6
76
43.4
Naga_100083g7
Nannochloropsis gaditana
9.1e-14
77.8
78
44.9
WBGene00004888
Caenorhabditis elegans
1.2e-13
77.4
78
46.2
sya00G182630
Synedra acus
1.6e-13
77.0
78
42.3
AA0011G02040
Aureococcus anophagefferens
2.0e-13
76.6
74
45.9
gene399
Fragilariopsis cylindrus
2.0e-13
76.6
82
40.2
fso191490
Fistulifera solaris
3.5e-13
75.9
77
44.2
ENSG00000177688
Homo sapiens
3.5e-13
75.9
77
48.1
emh123620
Emiliania huxleyi
4.5e-13
75.5
88
45.5
tps77940
Thalassiosira pseudonana
7.7e-13
74.7
69
44.9
gsu120520
Galdieria sulphuraria
2.2e-12
73.2
77
41.6
AT5G48710
Arabidopsis thaliana
3.8e-12
72.4
93
40.9
fso43260
Fistulifera solaris
3.8e-12
72.4
76
39.5
fso191500
Fistulifera solaris
3.8e-12
72.4
76
39.5
emh467620
Emiliania huxleyi
1.1e-11
70.9
69
46.4
tps135390
Thalassiosira pseudonana
1.5e-11
70.5
70
45.7
Sro663_g183500
Seminavis robusta
1.9e-11
70.1
75
41.3
ENSG00000184900
Homo sapiens
4.2e-11
68.9
72
48.6
emh403140
Emiliania huxleyi
9.4e-11
67.8
51
58.8
emh185000
Emiliania huxleyi
9.4e-11
67.8
51
58.8
emh334950
Emiliania huxleyi
1.2e-10
67.4
77
45.5
emh169370
Emiliania huxleyi
1.2e-10
67.4
77
45.5
ENSG00000116030
Homo sapiens
1.2e-10
67.4
81
39.5
CC00G68690
Cyclotella cryptica
1.6e-10
67.0
94
35.1
emh701480
Emiliania huxleyi
4.7e-10
65.5
68
48.5
emh597500
Emiliania huxleyi
1.0e-09
64.3
82
41.5
emh527020
Emiliania huxleyi
1.0e-09
64.3
82
41.5
AT5G48700
Arabidopsis thaliana
1.4e-09
63.9
90
36.7
Cre17.g716200
Chlamydomonas reinhardtii
4.0e-09
62.4
82
37.8
emh694030
Emiliania huxleyi
5.2e-09
62.0
82
40.2
emh512060
Emiliania huxleyi
5.2e-09
62.0
97
37.1
emh247180
Emiliania huxleyi
5.2e-09
62.0
97
37.1
AA1344G00010
Aureococcus anophagefferens
5.7e-08
58.5
76
35.5
Cre17.g716150
Chlamydomonas reinhardtii
5.7e-08
58.5
83
37.3
tho340540
Thalassiosira oceanica
7.5e-08
58.2
92
34.8
Cre17.g716301
Chlamydomonas reinhardtii
3.7e-07
55.8
90
34.4
AA0061G00010
Aureococcus anophagefferens
8.3e-07
54.7
76
32.9
tho570160
Thalassiosira oceanica
1.8e-06
53.5
75
34.7
Ec-27_001840
Ectocarpus siliculosus
7.0e-06
51.6
73
28.8
AT1G68185
Arabidopsis thaliana
9.1e-06
51.2
99
28.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (6 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (8 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (14 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (2 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (6 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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