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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Pp3c11_16260
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Pp3c11_16260
Physcomitrella patens
9.9e-133
474.2
242
100.0
Pp3c21_15430
Physcomitrella patens
3.7e-55
216.5
192
57.8
Pp3c21_13430
Physcomitrella patens
6.3e-55
215.7
192
57.8
AT5G13450
Arabidopsis thaliana
1.9e-27
124.4
189
34.4
WBGene00000230
Caenorhabditis elegans
4.3e-27
123.2
198
35.9
ENSG00000241837
Homo sapiens
1.3e-23
111.7
183
30.1
ptri180750
Phaeodactylum tricornutum
1.3e-23
111.7
179
34.6
FBgn0016691
Drosophila melanogaster
2.2e-23
110.9
193
32.1
tps208450
Thalassiosira pseudonana
1.2e-21
105.1
180
32.8
fso25330
Fistulifera solaris
3.5e-21
103.6
178
34.3
fso116180
Fistulifera solaris
3.5e-21
103.6
178
34.3
ps00G01800
Pseudo-nitzschia multiseries
1.0e-20
102.1
179
31.8
sya00G66650
Synedra acus
1.7e-20
101.3
181
32.6
sya00G66660
Synedra acus
1.7e-20
101.3
181
32.6
gene14016
Fragilariopsis cylindrus
3.9e-20
100.1
177
30.5
tho290880
Thalassiosira oceanica
8.7e-20
99.0
178
32.6
CC00G159510
Cyclotella cryptica
1.9e-19
97.8
180
30.6
SPCC1840.06
Schizosaccharomyces pombe
4.3e-19
96.7
184
30.4
ccr147380
Chondrus crispus
2.8e-18
94.0
181
28.7
YDR298C
Saccharomyces cerevisiae strain S288C
3.6e-18
93.6
186
32.3
sya00G10830
Synedra acus
8.1e-18
92.4
171
31.6
Sro1247_g255840
Seminavis robusta
4.0e-17
90.1
190
28.9
sya00G268780
Synedra acus
1.5e-16
88.2
171
29.8
emh315740
Emiliania huxleyi
2.6e-16
87.4
182
32.4
CM05G01980
Cyanidioschyzon merolae
5.8e-16
86.3
185
28.1
CM07G00040
Cyanidioschyzon merolae
5.8e-16
86.3
185
28.1
Cre16.g680000
Chlamydomonas reinhardtii
1.7e-12
74.7
182
26.4
Cre11.g467569
Chlamydomonas reinhardtii
3.6e-10
67.0
177
27.7
pte150650
Paramecium tetraurelia
4.8e-10
66.6
177
25.4
ENSG00000249209
Homo sapiens
6.2e-10
66.2
131
28.2
pte347800
Paramecium tetraurelia
1.4e-09
65.1
177
26.0
AA0011G01800
Aureococcus anophagefferens
1.8e-09
64.7
178
25.3
pte120150
Paramecium tetraurelia
1.8e-09
64.7
177
24.9
pte391730
Paramecium tetraurelia
1.8e-09
64.7
177
26.0
gsu28270
Galdieria sulphuraria
6.9e-09
62.8
165
25.5
Pp3c23_11680
Physcomitrella patens
2.0e-08
61.2
180
26.7
AT4G09650
Arabidopsis thaliana
2.6e-08
60.8
179
25.1
Pp3c24_12520
Physcomitrella patens
4.9e-07
56.6
180
26.7
Pp3c23_6060
Physcomitrella patens
1.4e-06
55.1
173
26.0
tho603300
Thalassiosira oceanica
2.4e-06
54.3
109
31.2
AACG00310
Aureococcus anophagefferens
5.4e-06
53.1
176
26.1
gsu_chlor00G01060
Galdieria sulphuraria
5.4e-06
53.1
171
24.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (1 genes)
Synedra acus (4 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing