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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
PSNMU-V1.4_AUG-EV-PASAV3_0116820
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
PSNMU-V1.4_AUG-EV-PASAV3_0116820
Pseudo-nitzschia multistriata
1.6e-124
446.8
224
100.0
gene8658
Fragilariopsis cylindrus
1.3e-86
320.9
196
81.6
Sro767_g199460
Seminavis robusta
3.0e-75
283.1
224
63.8
fso144180
Fistulifera solaris
4.0e-72
272.7
230
61.3
fso59450
Fistulifera solaris
9.0e-72
271.6
225
61.3
CC00G31930
Cyclotella cryptica
9.7e-66
251.5
232
56.9
tho338240
Thalassiosira oceanica
1.6e-65
250.8
226
54.9
sya00G157310
Synedra acus
2.4e-64
246.9
224
58.9
ptri98960
Phaeodactylum tricornutum
1.3e-62
241.1
155
72.9
tps185620
Thalassiosira pseudonana
6.1e-60
232.3
168
64.9
Ec-13_002970
Ectocarpus siliculosus
4.5e-55
216.1
165
63.0
Naga_100108g8
Nannochloropsis gaditana
7.9e-52
205.3
157
60.5
ps00G51610
Pseudo-nitzschia multiseries
1.1e-50
201.4
110
88.2
Cre08.g372400
Chlamydomonas reinhardtii
2.0e-50
200.7
168
57.1
FBgn0038515
Drosophila melanogaster
5.7e-50
199.1
206
50.0
AA0002G05050
Aureococcus anophagefferens
9.7e-50
198.4
159
59.7
AT1G17280
Arabidopsis thaliana
2.8e-49
196.8
165
53.3
AT5G50430
Arabidopsis thaliana
2.8e-49
196.8
164
54.3
Pp3c22_19100
Physcomitrella patens
3.7e-49
196.4
237
41.4
WBGene00022450
Caenorhabditis elegans
1.9e-45
184.1
177
48.6
ENSG00000160087
Homo sapiens
2.1e-44
180.6
180
49.4
emh514050
Emiliania huxleyi
2.3e-43
177.2
154
54.5
emh281400
Emiliania huxleyi
2.3e-43
177.2
154
54.5
ccr48880
Chondrus crispus
3.7e-41
169.9
220
40.9
ps00G156740
Pseudo-nitzschia multiseries
6.3e-41
169.1
191
45.0
SPAC10F6.05c
Schizosaccharomyces pombe
7.0e-40
165.6
227
42.3
gsu124320
Galdieria sulphuraria
2.9e-38
160.2
154
46.8
PSNMU-V1.4_AUG-EV-PASAV3_0083110
Pseudo-nitzschia multistriata
3.8e-38
159.8
183
44.8
ps00G51600
Pseudo-nitzschia multiseries
3.8e-38
159.8
122
70.5
Sro642_g180210
Seminavis robusta
5.5e-37
156.0
145
52.4
gene285
Fragilariopsis cylindrus
7.2e-37
155.6
145
49.7
WBGene00006710
Caenorhabditis elegans
2.1e-36
154.1
146
48.6
emh300910
Emiliania huxleyi
2.1e-36
154.1
161
49.1
YER100W
Saccharomyces cerevisiae strain S288C
2.7e-36
153.7
193
45.6
sya00G77170
Synedra acus
5.7e-34
146.0
147
49.0
AA0004G04980
Aureococcus anophagefferens
1.6e-31
137.9
152
44.7
gsu115920
Galdieria sulphuraria
8.0e-28
125.6
119
42.9
pte689230
Paramecium tetraurelia
1.0e-27
125.2
194
33.0
WBGene00006703
Caenorhabditis elegans
9.8e-26
118.6
143
39.2
pte595600
Paramecium tetraurelia
1.4e-24
114.8
160
36.2
Cre03.g202897
Chlamydomonas reinhardtii
2.4e-24
114.0
136
39.7
fso75740
Fistulifera solaris
2.4e-24
114.0
201
31.3
pte120030
Paramecium tetraurelia
2.4e-24
114.0
135
40.0
fso13070
Fistulifera solaris
3.1e-24
113.6
145
35.2
ptri123240
Phaeodactylum tricornutum
3.1e-24
113.6
172
32.6
ENSG00000198833
Homo sapiens
5.4e-24
112.8
139
37.4
PSNMU-V1.4_AUG-EV-PASAV3_0106310
Pseudo-nitzschia multistriata
5.4e-24
112.8
113
42.5
AT3G17000
Arabidopsis thaliana
9.1e-24
112.1
209
30.6
emh274770
Emiliania huxleyi
1.2e-23
111.7
139
38.1
ps00G39300
Pseudo-nitzschia multiseries
2.7e-23
110.5
112
41.1
CC00G209070
Cyclotella cryptica
3.5e-23
110.2
118
39.0
sya00G148300
Synedra acus
3.5e-23
110.2
196
30.1
Sro199_g084410
Seminavis robusta
4.5e-23
109.8
146
34.2
Ec-26_004480
Ectocarpus siliculosus
5.9e-23
109.4
133
36.8
gene9668
Fragilariopsis cylindrus
7.7e-23
109.0
142
34.5
ps00G112250
Pseudo-nitzschia multiseries
1.3e-22
108.2
142
33.8
CM19G03210
Cyanidioschyzon merolae
1.7e-22
107.8
138
34.1
emh213880
Emiliania huxleyi
1.7e-22
107.8
110
42.7
Pp3c7_24370
Physcomitrella patens
1.7e-22
107.8
133
36.8
ccr189500
Chondrus crispus
2.9e-22
107.1
109
39.4
tps166950
Thalassiosira pseudonana
2.9e-22
107.1
142
33.8
Naga_100255g2
Nannochloropsis gaditana
1.5e-21
104.8
133
36.8
tho207100
Thalassiosira oceanica
4.2e-21
103.2
112
38.4
tho73800
Thalassiosira oceanica
5.5e-21
102.8
163
33.1
AA0018G01070
Aureococcus anophagefferens
7.2e-21
102.4
133
32.3
sya00G252690
Synedra acus
1.6e-20
101.3
108
38.0
CC00G53390
Cyclotella cryptica
4.7e-20
99.8
107
37.4
tps04110
Thalassiosira pseudonana
1.8e-19
97.8
115
35.7
pte150770
Paramecium tetraurelia
8.9e-19
95.5
135
36.3
gene18490
Fragilariopsis cylindrus
4.4e-18
93.2
113
36.3
Naga_100038g12
Nannochloropsis gaditana
4.4e-18
93.2
121
34.7
fso103970
Fistulifera solaris
3.7e-17
90.1
112
35.7
ptri21770
Phaeodactylum tricornutum
1.1e-16
88.6
155
32.9
fso04910
Fistulifera solaris
1.4e-16
88.2
109
36.7
Sro583_g170600
Seminavis robusta
7.0e-16
85.9
108
37.0
Ec-09_004050
Ectocarpus siliculosus
1.7e-14
81.3
122
37.7
ENSG00000159202
Homo sapiens
1.4e-11
71.6
123
31.7
ccr194060
Chondrus crispus
2.3e-11
70.9
116
37.1
AT5G25760
Arabidopsis thaliana
5.2e-11
69.7
119
31.1
ccr158960
Chondrus crispus
8.9e-11
68.9
173
28.3
YMR022W
Saccharomyces cerevisiae strain S288C
8.9e-11
68.9
150
33.3
FBgn0028913
Drosophila melanogaster
1.2e-10
68.6
118
33.9
SPBC1105.09
Schizosaccharomyces pombe
1.5e-10
68.2
148
31.1
AT2G16740
Arabidopsis thaliana
1.3e-09
65.1
119
31.9
ccr168860
Chondrus crispus
1.3e-09
65.1
120
31.7
AT4G27960
Arabidopsis thaliana
2.2e-09
64.3
121
31.4
CM18G00100
Cyanidioschyzon merolae
2.2e-09
64.3
119
31.1
AT5G41700
Arabidopsis thaliana
4.9e-09
63.2
119
33.6
Cre16.g693700
Chlamydomonas reinhardtii
4.9e-09
63.2
119
31.9
ptri56240
Phaeodactylum tricornutum
6.4e-09
62.8
118
32.2
fso04130
Fistulifera solaris
1.4e-08
61.6
118
31.4
fso103140
Fistulifera solaris
1.4e-08
61.6
118
31.4
pte763910
Paramecium tetraurelia
1.4e-08
61.6
118
31.4
sya00G244810
Synedra acus
1.4e-08
61.6
141
29.8
tho336500
Thalassiosira oceanica
1.4e-08
61.6
147
29.3
FBgn0267384
Drosophila melanogaster
1.9e-08
61.2
151
32.5
emh148920
Emiliania huxleyi
1.9e-08
61.2
109
33.9
pte728350
Paramecium tetraurelia
1.9e-08
61.2
118
31.4
pte745200
Paramecium tetraurelia
1.9e-08
61.2
118
31.4
AA0012G02910
Aureococcus anophagefferens
2.4e-08
60.8
95
35.8
ENSG00000099804
Homo sapiens
2.4e-08
60.8
128
32.0
Cre12.g546650
Chlamydomonas reinhardtii
3.2e-08
60.5
148
27.0
Ec-07_007090
Ectocarpus siliculosus
3.2e-08
60.5
158
27.2
pte165070
Paramecium tetraurelia
3.2e-08
60.5
132
28.8
AA0001G02480
Aureococcus anophagefferens
5.4e-08
59.7
192
28.6
ENSG00000115760
Homo sapiens
5.4e-08
59.7
214
28.5
Cre06.g292800
Chlamydomonas reinhardtii
1.2e-07
58.5
125
30.4
FBgn0267383
Drosophila melanogaster
1.6e-07
58.2
142
25.4
fso57710
Fistulifera solaris
2.0e-07
57.8
125
31.2
CM02G00150
Cyanidioschyzon merolae
2.7e-07
57.4
120
27.5
FBgn0058045
Drosophila melanogaster
2.7e-07
57.4
141
27.0
SPBP16F5.04
Schizosaccharomyces pombe
2.7e-07
57.4
159
28.9
sya00G144400
Synedra acus
2.7e-07
57.4
130
29.2
sya00G193640
Synedra acus
2.7e-07
57.4
130
29.2
Sro759_g198170
Seminavis robusta
3.5e-07
57.0
125
30.4
Sro65_g036850
Seminavis robusta
3.5e-07
57.0
119
30.3
FBgn0035455
Drosophila melanogaster
4.6e-07
56.6
120
29.2
Sro1550_g281710
Seminavis robusta
4.6e-07
56.6
206
24.8
CC00G193370
Cyclotella cryptica
6.0e-07
56.2
212
25.0
gene18392
Fragilariopsis cylindrus
6.0e-07
56.2
125
28.8
AA0006G03980
Aureococcus anophagefferens
7.8e-07
55.8
127
28.3
PSNMU-V1.4_AUG-EV-PASAV3_0048190
Pseudo-nitzschia multistriata
7.8e-07
55.8
158
27.2
Pp3c8_1130
Physcomitrella patens
7.8e-07
55.8
82
34.1
tps105440
Thalassiosira pseudonana
1.3e-06
55.1
125
28.8
AT3G13550
Arabidopsis thaliana
1.7e-06
54.7
115
27.0
ps00G166590
Pseudo-nitzschia multiseries
1.7e-06
54.7
151
27.2
AT1G64230
Arabidopsis thaliana
2.3e-06
54.3
119
31.1
FBgn0030863
Drosophila melanogaster
3.0e-06
53.9
118
26.3
emh236790
Emiliania huxleyi
3.0e-06
53.9
115
29.6
Ec-23_001010
Ectocarpus siliculosus
3.9e-06
53.5
119
31.1
gsu102330
Galdieria sulphuraria
3.9e-06
53.5
150
28.7
ptri100360
Phaeodactylum tricornutum
3.9e-06
53.5
151
26.5
Cre08.g383702
Chlamydomonas reinhardtii
5.0e-06
53.1
131
30.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (5 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (6 genes)
Fistulifera solaris (9 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (6 genes)
Ectocarpus siliculosus (5 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (7 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (9 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (5 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (7 genes)
Paramecium tetraurelia (8 genes)
Seminavis robusta (7 genes)
Synedra acus (7 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (6 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing