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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
PSNMU-V1.4_AUG-EV-PASAV3_0114240
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
PSNMU-V1.4_AUG-EV-PASAV3_0114240
Pseudo-nitzschia multistriata
8.5e-191
667.9
442
100.0
ps00G01600
Pseudo-nitzschia multiseries
4.7e-173
609.0
442
92.1
Sro245_g097580
Seminavis robusta
4.8e-125
449.5
449
65.5
ptri216040
Phaeodactylum tricornutum
9.7e-110
398.7
455
66.2
gene10109
Fragilariopsis cylindrus
2.0e-107
391.0
450
67.6
sya00G54290
Synedra acus
3.2e-105
383.6
460
58.5
gene9502
Fragilariopsis cylindrus
1.3e-98
361.7
218
90.8
fso65130
Fistulifera solaris
8.5e-98
359.0
385
67.0
fso65490
Fistulifera solaris
8.5e-98
359.0
384
67.2
tps202970
Thalassiosira pseudonana
1.5e-70
268.5
466
48.1
CC00G44790
Cyclotella cryptica
9.1e-68
259.2
398
45.5
Naga_100020g13
Nannochloropsis gaditana
1.3e-42
175.6
459
37.0
AA0035G00610
Aureococcus anophagefferens
5.1e-18
94.0
468
29.7
ENSG00000007168
Homo sapiens
5.1e-18
94.0
151
39.1
FBgn0015754
Drosophila melanogaster
1.5e-17
92.4
155
38.1
WBGene00003047
Caenorhabditis elegans
1.2e-14
82.8
151
34.4
pte488030
Paramecium tetraurelia
1.5e-14
82.4
151
36.4
pte649660
Paramecium tetraurelia
2.6e-14
81.6
151
36.4
YOR269W
Saccharomyces cerevisiae strain S288C
7.9e-11
70.1
228
25.0
AA0020G01240
Aureococcus anophagefferens
6.7e-10
67.0
148
29.1
CC00G117480
Cyclotella cryptica
6.7e-10
67.0
56
64.3
AT1G49040
Arabidopsis thaliana
8.7e-10
66.6
151
29.1
tho324020
Thalassiosira oceanica
1.1e-09
66.2
50
60.0
Pp3c11_25160
Physcomitrella patens
9.6e-09
63.2
144
30.6
AT5G50230
Arabidopsis thaliana
3.7e-08
61.2
168
27.4
ENSG00000114742
Homo sapiens
3.7e-08
61.2
126
31.7
AA0012G01370
Aureococcus anophagefferens
8.1e-08
60.1
147
27.2
AT3G18140
Arabidopsis thaliana
1.4e-07
59.3
144
27.8
SPCC126.01c
Schizosaccharomyces pombe
1.8e-07
58.9
82
32.9
YNL006W
Saccharomyces cerevisiae strain S288C
5.3e-07
57.4
144
25.7
Cre04.g222000
Chlamydomonas reinhardtii
1.2e-06
56.2
184
23.9
ENSG00000102054
Homo sapiens
2.6e-06
55.1
129
31.8
pte410590
Paramecium tetraurelia
5.8e-06
53.9
153
20.9
pte743540
Paramecium tetraurelia
9.9e-06
53.1
59
39.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing