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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
5.8e-63
241.9
171
100.0
fso77050
Fistulifera solaris
3.8e-38
159.5
103
68.0
fso77080
Fistulifera solaris
1.1e-37
157.9
103
70.9
fso191720
Fistulifera solaris
1.1e-37
157.9
103
67.0
ptri130290
Phaeodactylum tricornutum
1.4e-37
157.5
103
69.9
fso160310
Fistulifera solaris
7.2e-37
155.2
103
67.0
Sro968_g226070
Seminavis robusta
1.2e-36
154.5
102
68.6
gene16313
Fragilariopsis cylindrus
5.2e-35
149.1
79
77.2
ps00G33510
Pseudo-nitzschia multiseries
5.2e-35
149.1
79
77.2
sya00G161050
Synedra acus
2.2e-33
143.7
97
63.9
Sro99_g050950
Seminavis robusta
2.8e-25
116.7
66
72.7
tho217020
Thalassiosira oceanica
1.2e-20
101.3
129
37.2
tps193950
Thalassiosira pseudonana
2.8e-17
90.1
53
62.3
tps130000
Thalassiosira pseudonana
8.3e-17
88.6
61
55.7
CC00G69060
Cyclotella cryptica
2.3e-14
80.5
60
51.7
tps142420
Thalassiosira pseudonana
2.3e-14
80.5
53
54.7
fso43770
Fistulifera solaris
1.8e-11
70.9
87
40.2
fso64760
Fistulifera solaris
1.8e-11
70.9
87
40.2
fso199510
Fistulifera solaris
3.0e-11
70.1
132
29.5
Sro70_g039030
Seminavis robusta
3.0e-11
70.1
88
36.4
sya00G196410
Synedra acus
4.0e-11
69.7
105
34.3
fso73640
Fistulifera solaris
6.8e-11
68.9
91
35.2
gene18213
Fragilariopsis cylindrus
8.9e-11
68.6
86
34.9
ps00G65070
Pseudo-nitzschia multiseries
8.9e-11
68.6
91
35.2
ptri69840
Phaeodactylum tricornutum
1.2e-10
68.2
85
38.8
ptri72160
Phaeodactylum tricornutum
3.4e-10
66.6
83
38.6
Sro9_g007130
Seminavis robusta
1.7e-09
64.3
58
48.3
ccr36960
Chondrus crispus
2.2e-09
63.9
121
36.4
Cre05.g248550
Chlamydomonas reinhardtii
2.2e-09
63.9
53
43.4
Pp3c25_14501
Physcomitrella patens
6.3e-09
62.4
115
30.4
Pp3c25_14500
Physcomitrella patens
6.3e-09
62.4
115
30.4
CC00G149660
Cyclotella cryptica
1.1e-08
61.6
56
46.4
Pp3c6_1960
Physcomitrella patens
1.8e-08
60.8
115
29.6
Naga_100090g9
Nannochloropsis gaditana
2.4e-08
60.5
56
41.1
pte243060
Paramecium tetraurelia
2.4e-08
60.5
66
37.9
AT3G62970
Arabidopsis thaliana
4.1e-08
59.7
87
34.5
AT1G74770
Arabidopsis thaliana
9.2e-08
58.5
86
31.4
CM13G01410
Cyanidioschyzon merolae
9.2e-08
58.5
56
37.5
Ec-26_004520
Ectocarpus siliculosus
2.0e-07
57.4
53
43.4
AT1G18910
Arabidopsis thaliana
2.7e-07
57.0
114
31.6
Cre17.g718300
Chlamydomonas reinhardtii
2.7e-07
57.0
78
30.8
AT5G18650
Arabidopsis thaliana
1.0e-06
55.1
61
36.1
AT5G22920
Arabidopsis thaliana
1.3e-06
54.7
59
39.0
ccr161060
Chondrus crispus
1.3e-06
54.7
119
28.6
Pp3c10_4820
Physcomitrella patens
1.7e-06
54.3
59
35.6
pte760660
Paramecium tetraurelia
1.7e-06
54.3
59
35.6
pte443830
Paramecium tetraurelia
2.9e-06
53.5
59
35.6
CC00G85450
Cyclotella cryptica
3.8e-06
53.1
36
55.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (4 genes)
Synedra acus (2 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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