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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
PSNMU-V1.4_AUG-EV-PASAV3_0101270
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
PSNMU-V1.4_AUG-EV-PASAV3_0101270
Pseudo-nitzschia multistriata
0.0e+00
1869.7
1003
100.0
ps00G07860
Pseudo-nitzschia multiseries
0.0e+00
1258.4
1005
65.4
gene13257
Fragilariopsis cylindrus
1.1e-302
1040.8
1000
56.9
ptri173770
Phaeodactylum tricornutum
4.1e-156
553.9
744
41.0
fso25450
Fistulifera solaris
1.6e-152
542.0
764
40.7
fso116280
Fistulifera solaris
5.2e-151
537.0
763
40.6
Sro101_g051510
Seminavis robusta
1.1e-150
535.8
829
39.2
CC00G49290
Cyclotella cryptica
3.7e-101
371.3
746
33.2
tps174470
Thalassiosira pseudonana
1.6e-99
365.9
771
32.8
sya00G96190
Synedra acus
3.2e-76
288.5
484
36.0
ENSG00000126216
Homo sapiens
4.0e-63
245.0
686
27.3
Pp3c24_16220
Physcomitrella patens
1.9e-60
236.1
664
26.8
Pp3c20_16750
Physcomitrella patens
1.3e-58
229.9
666
26.7
AT5G06680
Arabidopsis thaliana
2.6e-54
215.7
705
25.1
Naga_100060g14
Nannochloropsis gaditana
1.7e-53
213.0
611
27.8
SPBC428.20c
Schizosaccharomyces pombe
6.1e-51
204.5
585
26.8
gsu85750
Galdieria sulphuraria
7.4e-49
197.6
609
25.3
emh763790
Emiliania huxleyi
1.0e-37
160.6
549
26.8
pte263930
Paramecium tetraurelia
2.9e-37
159.1
685
23.6
pte316560
Paramecium tetraurelia
5.0e-37
158.3
715
22.9
pte73500
Paramecium tetraurelia
1.9e-36
156.4
697
23.5
FBgn0001612
Drosophila melanogaster
5.5e-36
154.8
622
22.3
pte344330
Paramecium tetraurelia
9.4e-36
154.1
651
23.8
Cre11.g467745
Chlamydomonas reinhardtii
3.9e-34
148.7
805
22.5
Ec-01_012030
Ectocarpus siliculosus
8.5e-29
131.0
424
26.7
ENSG00000130640
Homo sapiens
1.1e-28
130.6
683
23.3
PSNMU-V1.4_AUG-EV-PASAV3_0118550
Pseudo-nitzschia multistriata
3.2e-28
129.0
582
23.5
ps00G06430
Pseudo-nitzschia multiseries
1.0e-26
124.0
551
24.1
Pp3c23_1190
Physcomitrella patens
1.8e-26
123.2
504
22.6
Pp3c8_20000
Physcomitrella patens
2.3e-26
122.9
515
23.1
gene13733
Fragilariopsis cylindrus
7.5e-25
117.9
606
23.4
ptri91750
Phaeodactylum tricornutum
9.7e-25
117.5
595
22.4
AT5G17410
Arabidopsis thaliana
2.2e-24
116.3
605
22.1
FBgn0026430
Drosophila melanogaster
2.2e-24
116.3
563
21.7
fso119530
Fistulifera solaris
6.3e-24
114.8
596
24.0
fso30500
Fistulifera solaris
2.0e-22
109.8
615
23.6
Pp3c13_20568
Physcomitrella patens
1.3e-21
107.1
532
24.6
Pp3c13_20560
Physcomitrella patens
1.3e-21
107.1
532
24.6
Sro50_g029000
Seminavis robusta
1.3e-21
107.1
630
22.5
YNL126W
Saccharomyces cerevisiae strain S288C
6.1e-19
98.2
496
20.6
sya00G73720
Synedra acus
1.4e-18
97.1
508
22.4
CC00G57600
Cyclotella cryptica
3.0e-18
95.9
653
20.7
Pp3c14_20420
Physcomitrella patens
1.5e-17
93.6
598
23.1
AT3G53760
Arabidopsis thaliana
2.6e-17
92.8
621
21.1
SPBC365.15
Schizosaccharomyces pombe
3.4e-17
92.4
480
22.5
Naga_100001g52
Nannochloropsis gaditana
5.7e-17
91.7
623
21.7
tps159260
Thalassiosira pseudonana
3.7e-16
89.0
562
22.4
gsu84670
Galdieria sulphuraria
1.5e-12
77.0
548
21.4
sya00G96230
Synedra acus
1.0e-10
70.9
83
43.4
Pp3c8_15910
Physcomitrella patens
1.7e-08
63.5
161
28.0
ENSG00000137822
Homo sapiens
1.4e-07
60.5
552
18.1
Cre01.g019150
Chlamydomonas reinhardtii
2.4e-07
59.7
660
19.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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