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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
PSNMU-V1.4_AUG-EV-PASAV3_0099850
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
PSNMU-V1.4_AUG-EV-PASAV3_0099850
Pseudo-nitzschia multistriata
0.0e+00
1303.1
724
100.0
ps00G173860
Pseudo-nitzschia multiseries
2.4e-134
481.1
604
49.2
Sro556_g165920
Seminavis robusta
7.2e-78
293.5
605
35.2
fso64850
Fistulifera solaris
2.4e-73
278.5
603
35.2
fso43860
Fistulifera solaris
4.1e-73
277.7
687
33.5
ptri207540
Phaeodactylum tricornutum
6.1e-69
263.8
581
35.5
sya00G252680
Synedra acus
1.5e-64
249.2
687
32.8
FBgn0037554
Drosophila melanogaster
4.6e-16
88.2
90
50.0
emh530300
Emiliania huxleyi
1.5e-14
83.2
93
46.2
emh117440
Emiliania huxleyi
1.5e-14
83.2
93
46.2
emh67860
Emiliania huxleyi
1.5e-14
83.2
93
46.2
ENSG00000101751
Homo sapiens
9.5e-14
80.5
85
44.7
Cre03.g148050
Chlamydomonas reinhardtii
6.2e-13
77.8
349
25.5
CM01G00620
Cyanidioschyzon merolae
8.9e-12
73.9
139
34.5
ccr169420
Chondrus crispus
2.0e-11
72.8
143
33.6
gsu33630
Galdieria sulphuraria
2.0e-11
72.8
82
43.9
AA0002G04000
Aureococcus anophagefferens
1.9e-09
66.2
107
37.4
Cre07.g338602
Chlamydomonas reinhardtii
4.6e-08
61.6
74
43.2
Pp3c14_23660
Physcomitrella patens
8.6e-07
57.4
158
27.8
AT1G49980
Arabidopsis thaliana
1.5e-06
56.6
90
36.7
emh540590
Emiliania huxleyi
2.5e-06
55.8
170
28.2
Naga_100015g71
Nannochloropsis gaditana
7.3e-06
54.3
100
31.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing