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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
PSNMU-V1.4_AUG-EV-PASAV3_0071480
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
PSNMU-V1.4_AUG-EV-PASAV3_0071480
Pseudo-nitzschia multistriata
0.0e+00
1508.8
848
100.0
ptri24990
Phaeodactylum tricornutum
3.9e-160
567.0
723
45.0
fso116720
Fistulifera solaris
3.7e-158
560.5
571
52.7
sya00G46630
Synedra acus
5.9e-156
553.1
715
44.3
sya00G220810
Synedra acus
1.3e-155
552.0
715
44.5
Sro2704_g335160
Seminavis robusta
5.0e-155
550.1
499
56.1
tps83020
Thalassiosira pseudonana
2.3e-144
514.6
546
49.6
tho283560
Thalassiosira oceanica
9.1e-141
502.7
565
46.7
CC00G100220
Cyclotella cryptica
8.0e-137
489.6
562
47.5
gene5955
Fragilariopsis cylindrus
7.2e-122
439.9
441
53.5
gene5005
Fragilariopsis cylindrus
2.1e-121
438.3
441
53.3
fso25890
Fistulifera solaris
2.0e-119
431.8
368
59.8
AA0002G02070
Aureococcus anophagefferens
4.3e-74
281.2
443
38.8
Naga_100381g5
Nannochloropsis gaditana
2.4e-56
222.2
255
46.3
Ec-10_004330
Ectocarpus siliculosus
1.5e-50
203.0
254
47.6
CC00G45810
Cyclotella cryptica
9.7e-50
200.3
232
46.6
Pp3c14_7190
Physcomitrella patens
1.5e-42
176.4
480
30.4
ENSG00000141642
Homo sapiens
2.1e-36
156.0
490
29.0
CM20G05110
Cyanidioschyzon merolae
5.3e-32
141.4
483
27.3
ptri160130
Phaeodactylum tricornutum
3.0e-27
125.6
500
29.2
ccr119720
Chondrus crispus
2.6e-26
122.5
497
25.6
AA0017G01380
Aureococcus anophagefferens
2.8e-25
119.0
481
27.0
PSNMU-V1.4_AUG-EV-PASAV3_0093510
Pseudo-nitzschia multistriata
2.8e-25
119.0
462
28.8
gsu91590
Galdieria sulphuraria
1.3e-22
110.2
369
27.1
sya00G117190
Synedra acus
2.2e-22
109.4
425
28.5
AA0002G01240
Aureococcus anophagefferens
3.8e-22
108.6
388
29.9
ccr18060
Chondrus crispus
4.0e-19
98.6
435
28.3
gsu129700
Galdieria sulphuraria
1.2e-18
97.1
495
25.5
tho113940
Thalassiosira oceanica
2.8e-17
92.4
533
23.6
Pp3s169_60
Physcomitrella patens
2.0e-15
86.3
216
31.5
Sro1330_g263430
Seminavis robusta
1.0e-14
84.0
417
25.4
Cre12.g492250
Chlamydomonas reinhardtii
6.5e-14
81.3
587
21.8
ps00G21990
Pseudo-nitzschia multiseries
1.1e-13
80.5
456
24.8
CC00G78500
Cyclotella cryptica
1.9e-13
79.7
458
26.0
emh293550
Emiliania huxleyi
4.0e-11
72.0
174
32.8
emh82240
Emiliania huxleyi
4.4e-10
68.6
169
32.5
CC00G136280
Cyclotella cryptica
1.3e-09
67.0
74
50.0
gene5135
Fragilariopsis cylindrus
1.3e-09
67.0
157
31.2
gene5814
Fragilariopsis cylindrus
2.2e-09
66.2
154
31.8
emh589510
Emiliania huxleyi
6.3e-09
64.7
123
30.9
emh23530
Emiliania huxleyi
6.3e-09
64.7
123
30.9
fso134120
Fistulifera solaris
1.1e-08
63.9
89
40.4
tps66970
Thalassiosira pseudonana
2.4e-08
62.8
153
30.1
Cre09.g394700
Chlamydomonas reinhardtii
5.4e-08
61.6
93
35.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (3 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing