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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
PSNMU-V1.4_AUG-EV-PASAV3_0056890
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
PSNMU-V1.4_AUG-EV-PASAV3_0056890
Pseudo-nitzschia multistriata
0.0e+00
4077.7
2070
100.0
ps00G06180
Pseudo-nitzschia multiseries
0.0e+00
1602.4
1066
76.6
gene13206
Fragilariopsis cylindrus
0.0e+00
1515.7
955
77.3
ptri10840
Phaeodactylum tricornutum
0.0e+00
1191.8
2109
39.5
Sro182_g079230
Seminavis robusta
0.0e+00
1163.7
2113
37.4
fso192580
Fistulifera solaris
1.9e-296
1021.1
1839
37.2
fso102120
Fistulifera solaris
2.3e-294
1014.2
1827
37.4
CC00G80650
Cyclotella cryptica
7.9e-271
936.0
2053
34.2
tps06910
Thalassiosira pseudonana
1.7e-241
838.6
1185
42.4
sya00G197860
Synedra acus
3.3e-176
621.7
810
43.2
Pp3c11_19460
Physcomitrella patens
1.9e-155
552.7
1103
36.1
ENSG00000153107
Homo sapiens
3.0e-153
545.4
1170
32.6
AA0026G00290
Aureococcus anophagefferens
6.9e-150
534.3
849
38.2
FBgn0004391
Drosophila melanogaster
8.2e-135
484.2
1192
30.7
ccr66020
Chondrus crispus
1.1e-118
430.6
1215
29.5
AT5G05560
Arabidopsis thaliana
4.2e-115
418.7
1112
30.0
Ec-14_001510
Ectocarpus siliculosus
5.5e-115
418.3
1027
29.6
emh133690
Emiliania huxleyi
5.2e-105
385.2
682
35.9
tho350800
Thalassiosira oceanica
4.2e-99
365.5
488
41.6
gsu49860
Galdieria sulphuraria
3.8e-92
342.4
982
29.1
AA0033G00400
Aureococcus anophagefferens
1.1e-86
324.3
371
47.7
Cre13.g579100
Chlamydomonas reinhardtii
2.5e-83
313.2
843
28.6
SPBC106.09
Schizosaccharomyces pombe
6.2e-82
308.5
716
30.7
tho586200
Thalassiosira oceanica
6.6e-76
288.5
277
59.2
pte26530
Paramecium tetraurelia
3.3e-75
286.2
711
28.6
WBGene00003133
Caenorhabditis elegans
4.7e-58
229.2
736
26.1
tho85640
Thalassiosira oceanica
4.9e-47
192.6
1137
24.5
sya00G197850
Synedra acus
2.3e-44
183.7
313
39.6
YNL172W
Saccharomyces cerevisiae strain S288C
1.5e-43
181.0
883
23.7
CM18G00810
Cyanidioschyzon merolae
7.4e-35
152.1
1020
22.5
Sro182_g079250
Seminavis robusta
1.0e-31
141.7
120
60.0
Naga_100052g39
Nannochloropsis gaditana
2.5e-27
127.1
221
38.0
emh406700
Emiliania huxleyi
2.8e-10
70.5
152
36.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing