Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
PSNMU-V1.4_AUG-EV-PASAV3_0048960
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
PSNMU-V1.4_AUG-EV-PASAV3_0048960
Pseudo-nitzschia multistriata
0.0e+00
2059.6
1165
100.0
ps00G135460
Pseudo-nitzschia multiseries
9.8e-287
988.0
560
86.4
gene1104
Fragilariopsis cylindrus
6.6e-267
922.2
1016
51.7
ptri190020
Phaeodactylum tricornutum
4.0e-195
683.7
612
55.9
Sro345_g122490
Seminavis robusta
1.6e-180
635.2
581
54.9
sya00G151810
Synedra acus
1.4e-176
622.1
590
53.6
CC00G47930
Cyclotella cryptica
2.3e-174
614.8
591
53.1
gene8944
Fragilariopsis cylindrus
3.4e-170
600.9
366
77.3
tps94420
Thalassiosira pseudonana
6.4e-169
596.7
511
58.3
tho295100
Thalassiosira oceanica
2.2e-137
491.9
425
56.9
Naga_100445g1
Nannochloropsis gaditana
1.4e-112
409.5
577
40.4
AT5G39840
Arabidopsis thaliana
2.1e-111
405.6
532
42.5
Ec-11_000550
Ectocarpus siliculosus
1.8e-110
402.5
569
40.1
Pp3c11_24680
Physcomitrella patens
4.3e-109
397.9
517
41.4
AA0012G01140
Aureococcus anophagefferens
1.1e-104
383.3
493
43.2
gsu141650
Galdieria sulphuraria
8.8e-102
373.6
565
39.3
AT4G14790
Arabidopsis thaliana
4.4e-93
344.7
479
40.1
ENSG00000156502
Homo sapiens
4.5e-90
334.7
510
39.4
FBgn0037232
Drosophila melanogaster
2.1e-87
325.9
509
39.3
gsu110850
Galdieria sulphuraria
6.7e-86
320.9
502
35.5
WBGene00007444
Caenorhabditis elegans
4.8e-84
314.7
503
38.4
Naga_100019g77
Nannochloropsis gaditana
1.8e-83
312.8
519
35.8
SPAC637.11
Schizosaccharomyces pombe
1.6e-82
309.7
394
42.6
YPL029W
Saccharomyces cerevisiae strain S288C
2.8e-76
288.9
498
36.9
CM16G01410
Cyanidioschyzon merolae
1.7e-65
253.1
569
32.2
Cre06.g270900
Chlamydomonas reinhardtii
1.4e-46
190.3
642
26.8
AA0016G01420
Aureococcus anophagefferens
1.8e-30
136.7
290
35.2
sya00G127370
Synedra acus
2.7e-26
122.9
280
32.5
ps00G40990
Pseudo-nitzschia multiseries
5.8e-21
105.1
245
32.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing