Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
PSNMU-V1.4_AUG-EV-PASAV3_0043040
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
PSNMU-V1.4_AUG-EV-PASAV3_0043040
Pseudo-nitzschia multistriata
0.0e+00
1303.5
652
100.0
ps00G12080
Pseudo-nitzschia multiseries
0.0e+00
1188.7
652
90.8
gene11423
Fragilariopsis cylindrus
0.0e+00
1111.3
655
83.8
Sro1226_g254240
Seminavis robusta
4.8e-267
921.8
665
69.9
ptri181610
Phaeodactylum tricornutum
3.1e-266
919.1
642
71.5
Sro102_g052020
Seminavis robusta
1.3e-256
887.1
672
66.8
sya00G226970
Synedra acus
2.6e-252
872.8
644
67.9
fso171560
Fistulifera solaris
2.9e-243
842.8
662
65.1
fso202300
Fistulifera solaris
6.4e-243
841.6
662
65.3
CC00G208820
Cyclotella cryptica
7.8e-233
808.1
661
63.1
tps161940
Thalassiosira pseudonana
9.5e-223
774.6
635
63.1
sya00G116330
Synedra acus
2.4e-157
557.4
389
72.8
Naga_100060g4
Nannochloropsis gaditana
5.9e-140
499.6
649
43.6
Cre14.g611850
Chlamydomonas reinhardtii
9.8e-135
482.3
650
43.2
Pp3c8_25110
Physcomitrella patens
4.7e-129
463.4
651
41.8
Pp3c8_25140
Physcomitrella patens
4.7e-129
463.4
651
41.8
AT1G10950
Arabidopsis thaliana
8.9e-120
432.6
636
40.7
FBgn0035622
Drosophila melanogaster
4.1e-117
423.7
651
38.4
WBGene00021506
Caenorhabditis elegans
2.1e-108
394.8
604
40.7
Cre01.g024350
Chlamydomonas reinhardtii
2.4e-93
344.7
640
34.2
AA0053G00330
Aureococcus anophagefferens
1.3e-86
322.4
657
31.8
fso121590
Fistulifera solaris
3.8e-86
320.9
668
32.2
fso30320
Fistulifera solaris
4.9e-86
320.5
668
32.0
ENSG00000077147
Homo sapiens
9.3e-85
316.2
625
33.1
ptri105580
Phaeodactylum tricornutum
1.2e-84
315.8
651
30.9
AT1G14670
Arabidopsis thaliana
6.0e-84
313.5
652
31.1
AT2G01970
Arabidopsis thaliana
1.8e-83
312.0
662
32.0
Sro219_g090580
Seminavis robusta
1.5e-82
308.9
648
30.6
Pp3c21_16480
Physcomitrella patens
4.3e-82
307.4
635
31.3
CC00G04930
Cyclotella cryptica
3.1e-80
301.2
671
30.4
Ec-28_002710
Ectocarpus siliculosus
1.5e-79
298.9
638
31.3
Pp3c18_8900
Physcomitrella patens
2.6e-79
298.1
657
30.4
tho81180
Thalassiosira oceanica
8.4e-78
293.1
672
30.7
Pp3c17_2590
Physcomitrella patens
1.2e-76
289.3
655
30.1
Cre16.g675958
Chlamydomonas reinhardtii
3.5e-76
287.7
622
30.1
AT5G37310
Arabidopsis thaliana
2.3e-75
285.0
654
29.5
ccr51260
Chondrus crispus
1.1e-74
282.7
651
31.6
ENSG00000100926
Homo sapiens
4.8e-73
277.3
633
32.2
ENSG00000254692
Homo sapiens
4.8e-73
277.3
633
32.2
Cre10.g439850
Chlamydomonas reinhardtii
5.3e-72
273.9
688
32.3
Pp3c15_4550
Physcomitrella patens
2.0e-71
271.9
659
30.8
AT1G55130
Arabidopsis thaliana
3.4e-71
271.2
669
30.9
AT3G13772
Arabidopsis thaliana
5.8e-71
270.4
665
31.0
Naga_100079g7
Nannochloropsis gaditana
2.2e-70
268.5
658
30.7
sya00G129170
Synedra acus
8.4e-70
266.5
645
28.4
Pp3c3_8560
Physcomitrella patens
1.1e-69
266.2
670
31.0
AT5G10840
Arabidopsis thaliana
1.9e-69
265.4
671
30.3
ps00G110540
Pseudo-nitzschia multiseries
1.9e-69
265.4
653
29.1
Pp3c12_1640
Physcomitrella patens
2.5e-69
265.0
652
28.8
Pp3c9_8630
Physcomitrella patens
4.2e-69
264.2
686
30.9
gene20187
Fragilariopsis cylindrus
7.1e-69
263.5
650
29.4
AT5G25100
Arabidopsis thaliana
1.6e-68
262.3
699
30.5
Pp3c24_7350
Physcomitrella patens
4.6e-68
260.8
662
30.5
Pp3c23_10950
Physcomitrella patens
7.9e-68
260.0
666
31.1
gsu120800
Galdieria sulphuraria
5.1e-67
257.3
659
29.9
sya00G47200
Synedra acus
3.3e-66
254.6
640
28.0
AT1G08350
Arabidopsis thaliana
5.7e-66
253.8
639
28.3
AT2G24170
Arabidopsis thaliana
6.3e-65
250.4
671
29.4
ENSG00000101337
Homo sapiens
5.3e-64
247.3
669
29.0
emh556840
Emiliania huxleyi
1.2e-63
246.1
687
30.3
AA0005G01340
Aureococcus anophagefferens
2.0e-63
245.4
669
27.8
Naga_100007g28
Nannochloropsis gaditana
1.0e-62
243.0
691
29.1
AA0834G00020
Aureococcus anophagefferens
5.0e-62
240.7
412
35.2
Pp3c4_24700
Physcomitrella patens
1.1e-61
239.6
700
29.6
ENSG00000125304
Homo sapiens
3.2e-61
238.0
680
28.4
Pp3c26_10670
Physcomitrella patens
3.2e-61
238.0
683
29.0
Naga_100123g7
Nannochloropsis gaditana
5.5e-61
237.3
675
28.9
gsu108650
Galdieria sulphuraria
7.2e-61
236.9
661
28.1
FBgn0028541
Drosophila melanogaster
1.8e-59
232.3
667
27.7
gsu126540
Galdieria sulphuraria
2.3e-59
231.9
660
26.7
Ec-15_002140
Ectocarpus siliculosus
3.0e-59
231.5
458
34.5
WBGene00006472
Caenorhabditis elegans
8.8e-59
229.9
645
27.6
AA0104G00050
Aureococcus anophagefferens
1.1e-58
229.6
668
27.8
emh259810
Emiliania huxleyi
3.3e-58
228.0
683
28.7
emh134480
Emiliania huxleyi
3.3e-58
228.0
683
28.7
Sro482_g151770
Seminavis robusta
4.3e-58
227.6
425
34.8
AT5G35160
Arabidopsis thaliana
1.7e-57
225.7
677
27.9
Pp3c26_10610
Physcomitrella patens
1.7e-57
225.7
680
28.1
ps00G193920
Pseudo-nitzschia multiseries
1.7e-57
225.7
697
28.6
fso177390
Fistulifera solaris
2.2e-57
225.3
461
34.3
Sro846_g210160
Seminavis robusta
2.2e-57
225.3
676
28.3
Ec-17_001670
Ectocarpus siliculosus
2.8e-57
224.9
445
34.2
Naga_100005g30
Nannochloropsis gaditana
4.8e-57
224.2
470
31.7
fso19090
Fistulifera solaris
6.3e-57
223.8
458
34.7
FBgn0032880
Drosophila melanogaster
8.2e-57
223.4
667
30.3
fso169750
Fistulifera solaris
8.2e-57
223.4
457
33.7
fso84120
Fistulifera solaris
1.1e-56
223.0
457
33.7
AA0008G03220
Aureococcus anophagefferens
1.4e-56
222.6
660
29.2
ptri128130
Phaeodactylum tricornutum
2.4e-56
221.9
451
34.8
WBGene00014119
Caenorhabditis elegans
5.3e-56
220.7
616
28.4
sya00G155240
Synedra acus
5.3e-56
220.7
461
33.8
AA0013G02870
Aureococcus anophagefferens
6.9e-56
220.3
659
29.0
Sro821_g207360
Seminavis robusta
9.1e-56
219.9
686
28.0
ccr53700
Chondrus crispus
1.2e-55
219.5
626
30.0
ps00G85080
Pseudo-nitzschia multiseries
1.2e-55
219.5
440
33.6
tho286860
Thalassiosira oceanica
1.2e-55
219.5
416
34.6
sya00G92270
Synedra acus
4.5e-55
217.6
680
29.1
tps142380
Thalassiosira pseudonana
5.9e-55
217.2
686
29.4
AT4G12650
Arabidopsis thaliana
1.7e-54
215.7
697
27.4
Ec-02_000340
Ectocarpus siliculosus
2.9e-54
214.9
447
32.4
ccr136160
Chondrus crispus
8.5e-54
213.4
686
26.2
CC00G91880
Cyclotella cryptica
8.5e-54
213.4
451
32.4
gene447
Fragilariopsis cylindrus
8.5e-54
213.4
400
33.8
CC00G73730
Cyclotella cryptica
1.1e-53
213.0
667
28.0
sya00G232960
Synedra acus
1.9e-53
212.2
501
30.9
tps21830
Thalassiosira pseudonana
1.9e-53
212.2
417
33.8
ptri128270
Phaeodactylum tricornutum
7.2e-53
210.3
657
28.9
Ec-21_005970
Ectocarpus siliculosus
9.4e-53
209.9
235
48.5
AA0178G00020
Aureococcus anophagefferens
1.2e-52
209.5
434
34.1
tps142400
Thalassiosira pseudonana
6.1e-52
207.2
446
32.1
SPBC1105.08
Schizosaccharomyces pombe
1.8e-51
205.7
449
35.0
emh249610
Emiliania huxleyi
2.3e-51
205.3
701
29.0
PSNMU-V1.4_AUG-EV-PASAV3_0053340
Pseudo-nitzschia multistriata
2.3e-51
205.3
673
27.9
Sro327_g118400
Seminavis robusta
2.3e-51
205.3
653
28.2
sya00G131840
Synedra acus
2.3e-51
205.3
680
28.7
YLR083C
Saccharomyces cerevisiae strain S288C
3.0e-51
204.9
693
27.4
Sro57_g033240
Seminavis robusta
3.0e-51
204.9
518
31.7
CM17G04740
Cyanidioschyzon merolae
5.1e-51
204.1
638
29.3
gene16368
Fragilariopsis cylindrus
6.7e-51
203.8
683
27.2
sya00G149130
Synedra acus
6.7e-51
203.8
443
34.5
ccr86320
Chondrus crispus
7.4e-50
200.3
448
31.5
ps00G30090
Pseudo-nitzschia multiseries
9.7e-50
199.9
684
26.5
CC00G190470
Cyclotella cryptica
1.3e-49
199.5
401
32.7
gene9076
Fragilariopsis cylindrus
1.3e-49
199.5
700
26.9
gene1362
Fragilariopsis cylindrus
6.3e-49
197.2
692
27.3
Ec-21_005980
Ectocarpus siliculosus
8.2e-49
196.8
375
35.7
PSNMU-V1.4_AUG-EV-PASAV3_0093910
Pseudo-nitzschia multistriata
1.1e-48
196.4
422
32.9
ptri86140
Phaeodactylum tricornutum
1.4e-48
196.1
432
31.9
fso126890
Fistulifera solaris
2.4e-48
195.3
711
28.1
ptri67940
Phaeodactylum tricornutum
5.3e-48
194.1
431
32.5
gene83
Fragilariopsis cylindrus
1.3e-46
189.5
444
31.1
PSNMU-V1.4_AUG-EV-PASAV3_0061280
Pseudo-nitzschia multistriata
2.2e-46
188.7
697
26.8
YDR107C
Saccharomyces cerevisiae strain S288C
2.9e-46
188.3
447
30.9
fso86790
Fistulifera solaris
5.0e-46
187.6
676
26.3
ptri190420
Phaeodactylum tricornutum
5.0e-46
187.6
708
27.8
emh126750
Emiliania huxleyi
6.5e-46
187.2
696
28.0
fso45680
Fistulifera solaris
3.2e-45
184.9
502
30.1
Cre12.g494350
Chlamydomonas reinhardtii
4.2e-45
184.5
439
31.9
fso153540
Fistulifera solaris
4.2e-45
184.5
676
26.2
sya00G86770
Synedra acus
2.7e-44
181.8
694
26.4
sya00G250320
Synedra acus
3.6e-44
181.4
664
24.7
tho17560
Thalassiosira oceanica
1.0e-43
179.9
700
26.4
Sro752_g197160
Seminavis robusta
3.9e-43
177.9
674
26.9
Sro752_g197170
Seminavis robusta
1.5e-42
176.0
673
26.7
ccr53680
Chondrus crispus
3.7e-41
171.4
671
26.2
ps00G173540
Pseudo-nitzschia multiseries
3.7e-41
171.4
440
30.5
tps128070
Thalassiosira pseudonana
1.2e-39
166.4
667
25.5
CC00G151020
Cyclotella cryptica
1.3e-38
162.9
677
24.8
Sro87_g046250
Seminavis robusta
1.9e-37
159.1
468
30.3
pte171410
Paramecium tetraurelia
6.1e-36
154.1
625
25.3
gsu20350
Galdieria sulphuraria
1.0e-35
153.3
619
24.4
sya00G200150
Synedra acus
1.8e-35
152.5
669
24.2
emh344360
Emiliania huxleyi
2.2e-30
135.6
321
33.3
emh32370
Emiliania huxleyi
2.2e-30
135.6
136
50.7
emh27710
Emiliania huxleyi
2.2e-30
135.6
136
50.7
pte110520
Paramecium tetraurelia
8.5e-30
133.7
616
24.4
emh380540
Emiliania huxleyi
1.5e-29
132.9
701
24.3
Pp3c8_25240
Physcomitrella patens
3.2e-29
131.7
135
50.4
emh43330
Emiliania huxleyi
3.6e-28
128.3
238
34.9
sya00G134780
Synedra acus
5.2e-27
124.4
399
26.3
pte356330
Paramecium tetraurelia
2.0e-26
122.5
669
21.5
fso53450
Fistulifera solaris
4.4e-26
121.3
266
30.5
AA0013G02780
Aureococcus anophagefferens
1.2e-23
113.2
163
38.7
pte380700
Paramecium tetraurelia
3.5e-23
111.7
670
20.1
Sro431_g141470
Seminavis robusta
2.3e-22
109.0
364
26.1
emh298660
Emiliania huxleyi
1.5e-21
106.3
701
23.4
Sro1782_g297170
Seminavis robusta
4.2e-21
104.8
500
23.0
emh35670
Emiliania huxleyi
4.7e-20
101.3
218
31.7
AA0989G00010
Aureococcus anophagefferens
5.2e-19
97.8
236
28.4
emh740980
Emiliania huxleyi
2.6e-18
95.5
141
39.7
emh767970
Emiliania huxleyi
3.7e-17
91.7
433
23.8
sya00G137370
Synedra acus
5.6e-13
77.8
401
22.7
sya00G146490
Synedra acus
1.3e-09
66.6
100
39.0
sya00G195000
Synedra acus
1.3e-09
66.6
100
39.0
sya00G195860
Synedra acus
2.0e-07
59.3
218
23.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (7 genes)
Thalassiosira pseudonana (5 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (6 genes)
Fistulifera solaris (13 genes)
Fragilariopsis cylindrus (7 genes)
Cyclotella cryptica (6 genes)
Aureococcus anophagefferens (9 genes)
Ectocarpus siliculosus (6 genes)
Nannochloropsis gaditana (5 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (12 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (5 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (14 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (13 genes)
Synedra acus (17 genes)
Physcomitrella patens (15 genes)
Chlamydomonas reinhardtii (5 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing