Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
PSNMU-V1.4_AUG-EV-PASAV3_0030360
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
PSNMU-V1.4_AUG-EV-PASAV3_0030360
Pseudo-nitzschia multistriata
0.0e+00
1300.4
635
100.0
ps00G29420
Pseudo-nitzschia multiseries
2.1e-246
853.2
620
68.5
gene14800
Fragilariopsis cylindrus
3.5e-177
623.2
635
53.7
Sro1369_g266930
Seminavis robusta
1.1e-87
325.9
658
35.4
CC00G46510
Cyclotella cryptica
6.3e-78
293.5
718
33.6
tho22100
Thalassiosira oceanica
2.9e-67
258.1
637
32.5
fso118670
Fistulifera solaris
8.2e-62
240.0
638
30.4
fso31390
Fistulifera solaris
3.8e-59
231.1
645
30.4
sya00G67070
Synedra acus
1.2e-28
129.8
286
34.3
AT1G11880
Arabidopsis thaliana
2.1e-20
102.4
489
24.7
FBgn0265174
Drosophila melanogaster
5.6e-18
94.4
518
24.7
ENSG00000060642
Homo sapiens
2.6e-15
85.5
403
25.8
Pp3c10_8190
Physcomitrella patens
3.4e-15
85.1
515
23.3
Ec-17_003500
Ectocarpus siliculosus
7.1e-13
77.4
226
29.2
SPAC18B11.05
Schizosaccharomyces pombe
1.8e-08
62.8
255
25.1
WBGene00020375
Caenorhabditis elegans
6.9e-08
60.8
577
22.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing