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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Naga_100101g1
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Naga_100101g1
Nannochloropsis gaditana
1.6e-294
1012.7
500
100.0
Pp3c8_15010
Physcomitrella patens
4.3e-66
253.8
491
34.2
AA0001G06600
Aureococcus anophagefferens
1.3e-65
252.3
475
36.8
ENSG00000104408
Homo sapiens
4.8e-65
250.4
494
35.0
ccr173580
Chondrus crispus
3.1e-64
247.7
508
33.5
Pp3c20_5690
Physcomitrella patens
3.4e-63
244.2
491
33.2
gsu91750
Galdieria sulphuraria
2.3e-59
231.5
483
32.3
Ec-22_002360
Ectocarpus siliculosus
3.9e-59
230.7
519
32.9
ptri90580
Phaeodactylum tricornutum
2.6e-58
228.0
531
31.5
Cre12.g498100
Chlamydomonas reinhardtii
1.1e-56
222.6
474
32.3
fso149900
Fistulifera solaris
1.4e-56
222.2
503
30.6
Sro810_g205830
Seminavis robusta
2.0e-55
218.4
528
31.8
AT3G57290
Arabidopsis thaliana
2.2e-54
214.9
490
32.7
ps00G02370
Pseudo-nitzschia multiseries
5.0e-54
213.8
531
32.0
PSNMU-V1.4_AUG-EV-PASAV3_0076870
Pseudo-nitzschia multistriata
6.5e-54
213.4
528
32.6
Sro361_g126450
Seminavis robusta
2.5e-53
211.5
526
31.0
fso155150
Fistulifera solaris
1.2e-52
209.1
503
29.4
WBGene00001228
Caenorhabditis elegans
1.0e-51
206.1
481
30.4
tho62560
Thalassiosira oceanica
1.0e-51
206.1
509
30.3
gene2327
Fragilariopsis cylindrus
5.2e-51
203.8
491
31.4
sya00G197740
Synedra acus
5.2e-51
203.8
496
32.1
FBgn0025582
Drosophila melanogaster
2.0e-50
201.8
473
31.1
CC00G173350
Cyclotella cryptica
2.6e-50
201.4
516
29.3
tps94680
Thalassiosira pseudonana
1.2e-42
176.0
491
28.9
Pp3c24_6740
Physcomitrella patens
4.8e-41
170.6
378
32.8
CM19G01020
Cyanidioschyzon merolae
3.7e-33
144.4
479
26.5
SPBC646.09c
Schizosaccharomyces pombe
6.6e-30
133.7
427
25.8
emh686360
Emiliania huxleyi
3.0e-27
124.8
163
40.5
emh705300
Emiliania huxleyi
2.3e-22
108.6
145
40.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (1 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing