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Functional clusters
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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-27_000830
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-27_000830
Ectocarpus siliculosus
2.7e-225
782.7
505
100.0
Naga_100191g7
Nannochloropsis gaditana
5.2e-35
150.6
385
29.4
Pp3c25_6520
Physcomitrella patens
2.8e-12
75.1
341
25.2
AT1G63690
Arabidopsis thaliana
1.8e-11
72.4
111
39.6
AT5G66160
Arabidopsis thaliana
2.4e-11
72.0
376
25.0
fso36130
Fistulifera solaris
1.2e-10
69.7
45
60.0
fso159830
Fistulifera solaris
1.2e-10
69.7
45
60.0
ENSG00000108523
Homo sapiens
3.4e-10
68.2
44
54.5
ENSG00000082996
Homo sapiens
3.4e-10
68.2
52
48.1
Sro524_g159890
Seminavis robusta
3.4e-10
68.2
45
57.8
ptri81540
Phaeodactylum tricornutum
4.5e-10
67.8
47
53.2
AT4G09560
Arabidopsis thaliana
9.9e-10
66.6
47
53.2
Ec-09_000080
Ectocarpus siliculosus
9.9e-10
66.6
43
55.8
FBgn0037442
Drosophila melanogaster
1.3e-09
66.2
50
50.0
tps79640
Thalassiosira pseudonana
1.3e-09
66.2
44
54.5
CC00G17380
Cyclotella cryptica
2.2e-09
65.5
44
50.0
Pp3c16_18860
Physcomitrella patens
2.2e-09
65.5
46
54.3
Pp3c6_7790
Physcomitrella patens
2.2e-09
65.5
47
53.2
Ec-12_006290
Ectocarpus siliculosus
2.9e-09
65.1
112
39.3
fso94460
Fistulifera solaris
2.9e-09
65.1
48
54.2
fso152140
Fistulifera solaris
4.9e-09
64.3
53
47.2
ptri179290
Phaeodactylum tricornutum
4.9e-09
64.3
51
54.9
Sro3117_g344110
Seminavis robusta
4.9e-09
64.3
46
52.2
fso80950
Fistulifera solaris
8.4e-09
63.5
48
54.2
ps00G09670
Pseudo-nitzschia multiseries
8.4e-09
63.5
46
47.8
tho482540
Thalassiosira oceanica
8.4e-09
63.5
45
51.1
Cre12.g544327
Chlamydomonas reinhardtii
1.1e-08
63.2
44
56.8
fso168280
Fistulifera solaris
1.1e-08
63.2
53
45.3
AT1G04790
Arabidopsis thaliana
1.4e-08
62.8
44
59.1
CC00G17850
Cyclotella cryptica
1.4e-08
62.8
45
55.6
tps88250
Thalassiosira pseudonana
1.4e-08
62.8
48
52.1
AT1G22670
Arabidopsis thaliana
1.9e-08
62.4
76
40.8
emh627360
Emiliania huxleyi
1.9e-08
62.4
52
53.8
emh31300
Emiliania huxleyi
1.9e-08
62.4
52
53.8
fso64340
Fistulifera solaris
1.9e-08
62.4
58
48.3
fso99680
Fistulifera solaris
1.9e-08
62.4
58
48.3
WBGene00007666
Caenorhabditis elegans
2.4e-08
62.0
43
53.5
Cre16.g680117
Chlamydomonas reinhardtii
2.4e-08
62.0
46
52.2
PSNMU-V1.4_AUG-EV-PASAV3_0023260
Pseudo-nitzschia multistriata
2.4e-08
62.0
47
48.9
sya00G81370
Synedra acus
2.4e-08
62.0
55
49.1
tho52940
Thalassiosira oceanica
2.4e-08
62.0
48
54.2
Cre12.g501450
Chlamydomonas reinhardtii
3.2e-08
61.6
49
49.0
Ec-26_006260
Ectocarpus siliculosus
3.2e-08
61.6
49
51.0
AT1G71980
Arabidopsis thaliana
4.2e-08
61.2
46
52.2
gene7198
Fragilariopsis cylindrus
4.2e-08
61.2
47
48.9
Pp3c10_8120
Physcomitrella patens
4.2e-08
61.2
380
24.5
AT1G14200
Arabidopsis thaliana
5.4e-08
60.8
45
48.9
ptri32180
Phaeodactylum tricornutum
5.4e-08
60.8
47
44.7
tps219390
Thalassiosira pseudonana
5.4e-08
60.8
45
51.1
ENSG00000239305
Homo sapiens
7.1e-08
60.5
49
46.9
Pp3c22_1990
Physcomitrella patens
7.1e-08
60.5
47
51.1
Sro494_g154270
Seminavis robusta
7.1e-08
60.5
52
50.0
tho81580
Thalassiosira oceanica
7.1e-08
60.5
45
48.9
AA0005G01700
Aureococcus anophagefferens
9.3e-08
60.1
47
46.8
emh651500
Emiliania huxleyi
9.3e-08
60.1
44
47.7
ENSG00000113269
Homo sapiens
9.3e-08
60.1
43
51.2
ps00G36280
Pseudo-nitzschia multiseries
9.3e-08
60.1
47
48.9
sya00G254510
Synedra acus
9.3e-08
60.1
43
53.5
Cre13.g580750
Chlamydomonas reinhardtii
1.2e-07
59.7
45
46.7
gene14370
Fragilariopsis cylindrus
1.2e-07
59.7
45
46.7
PSNMU-V1.4_AUG-EV-PASAV3_0080940
Pseudo-nitzschia multistriata
1.2e-07
59.7
44
50.0
tps152270
Thalassiosira pseudonana
1.2e-07
59.7
50
48.0
Pp3c25_15200
Physcomitrella patens
1.6e-07
59.3
45
44.4
sya00G191940
Synedra acus
1.6e-07
59.3
51
49.0
FBgn0004919
Drosophila melanogaster
2.1e-07
58.9
43
53.5
Ec-07_001840
Ectocarpus siliculosus
2.1e-07
58.9
45
51.1
pte588240
Paramecium tetraurelia
2.1e-07
58.9
45
48.9
pte676370
Paramecium tetraurelia
2.1e-07
58.9
45
53.3
ccr92060
Chondrus crispus
2.7e-07
58.5
46
45.7
CC00G20250
Cyclotella cryptica
2.7e-07
58.5
48
50.0
Pp3c19_21510
Physcomitrella patens
2.7e-07
58.5
46
50.0
Pp3c2_5960
Physcomitrella patens
2.7e-07
58.5
45
46.7
AT3G61180
Arabidopsis thaliana
3.5e-07
58.2
50
50.0
ccr68560
Chondrus crispus
3.5e-07
58.2
46
50.0
Cre10.g442750
Chlamydomonas reinhardtii
3.5e-07
58.2
45
48.9
Cre16.g649833
Chlamydomonas reinhardtii
3.5e-07
58.2
45
53.3
gsu100950
Galdieria sulphuraria
3.5e-07
58.2
43
53.5
ENSG00000105428
Homo sapiens
3.5e-07
58.2
418
23.9
PSNMU-V1.4_AUG-EV-PASAV3_0115420
Pseudo-nitzschia multistriata
3.5e-07
58.2
50
52.0
ps00G89230
Pseudo-nitzschia multiseries
3.5e-07
58.2
51
49.0
AT1G49850
Arabidopsis thaliana
4.6e-07
57.8
43
51.2
CC00G165670
Cyclotella cryptica
4.6e-07
57.8
46
43.5
emh387060
Emiliania huxleyi
4.6e-07
57.8
46
50.0
Ec-27_007010
Ectocarpus siliculosus
4.6e-07
57.8
47
51.1
Ec-00_003400
Ectocarpus siliculosus
4.6e-07
57.8
46
50.0
Ec-00_003390
Ectocarpus siliculosus
4.6e-07
57.8
46
50.0
pte500980
Paramecium tetraurelia
4.6e-07
57.8
45
51.1
ptri41190
Phaeodactylum tricornutum
4.6e-07
57.8
47
53.2
sya00G05810
Synedra acus
4.6e-07
57.8
43
46.5
AT4G34040
Arabidopsis thaliana
6.0e-07
57.4
46
50.0
Ec-08_003750
Ectocarpus siliculosus
6.0e-07
57.4
45
46.7
gene6781
Fragilariopsis cylindrus
6.0e-07
57.4
51
49.0
SPAC57A7.09
Schizosaccharomyces pombe
6.0e-07
57.4
45
44.4
sya00G270490
Synedra acus
6.0e-07
57.4
44
45.5
AT3G19950
Arabidopsis thaliana
7.9e-07
57.0
45
42.2
AT5G42940
Arabidopsis thaliana
7.9e-07
57.0
44
47.7
Ec-21_004940
Ectocarpus siliculosus
7.9e-07
57.0
48
45.8
AT2G15580
Arabidopsis thaliana
1.0e-06
56.6
45
44.4
AT3G63530
Arabidopsis thaliana
1.0e-06
56.6
49
44.9
emh670120
Emiliania huxleyi
1.0e-06
56.6
77
39.0
Ec-12_006580
Ectocarpus siliculosus
1.0e-06
56.6
46
52.2
gene19455
Fragilariopsis cylindrus
1.0e-06
56.6
46
50.0
gene19138
Fragilariopsis cylindrus
1.0e-06
56.6
47
44.7
ENSG00000183579
Homo sapiens
1.0e-06
56.6
51
45.1
Naga_100032g37
Nannochloropsis gaditana
1.0e-06
56.6
71
42.3
Naga_101076g3
Nannochloropsis gaditana
1.0e-06
56.6
42
50.0
PSNMU-V1.4_AUG-EV-PASAV3_0029140
Pseudo-nitzschia multistriata
1.0e-06
56.6
47
44.7
AT3G15070
Arabidopsis thaliana
1.3e-06
56.2
46
45.7
AT5G52140
Arabidopsis thaliana
1.3e-06
56.2
47
44.7
CM15G01620
Cyanidioschyzon merolae
1.3e-06
56.2
45
46.7
emh770360
Emiliania huxleyi
1.3e-06
56.2
47
48.9
emh247870
Emiliania huxleyi
1.3e-06
56.2
51
49.0
Ec-06_004730
Ectocarpus siliculosus
1.3e-06
56.2
43
53.5
fso41180
Fistulifera solaris
1.3e-06
56.2
43
46.5
fso74690
Fistulifera solaris
1.3e-06
56.2
43
53.5
fso91140
Fistulifera solaris
1.3e-06
56.2
43
53.5
fso101440
Fistulifera solaris
1.3e-06
56.2
43
44.2
fso167560
Fistulifera solaris
1.3e-06
56.2
43
46.5
ENSG00000170153
Homo sapiens
1.3e-06
56.2
43
51.2
ps00G09620
Pseudo-nitzschia multiseries
1.3e-06
56.2
44
47.7
ps00G54440
Pseudo-nitzschia multiseries
1.3e-06
56.2
42
45.2
AT3G60080
Arabidopsis thaliana
1.8e-06
55.8
46
47.8
AT5G56340
Arabidopsis thaliana
1.8e-06
55.8
45
44.4
fso153950
Fistulifera solaris
1.8e-06
55.8
43
44.2
gsu103470
Galdieria sulphuraria
1.8e-06
55.8
43
55.8
pte310600
Paramecium tetraurelia
1.8e-06
55.8
46
47.8
pte680280
Paramecium tetraurelia
1.8e-06
55.8
46
47.8
AT1G35625
Arabidopsis thaliana
2.3e-06
55.5
43
46.5
AT5G45290
Arabidopsis thaliana
2.3e-06
55.5
46
45.7
WBGene00012194
Caenorhabditis elegans
2.3e-06
55.5
45
46.7
WBGene00023404
Caenorhabditis elegans
2.3e-06
55.5
49
46.9
Cre11.g476250
Chlamydomonas reinhardtii
2.3e-06
55.5
43
46.5
Cre16.g651400
Chlamydomonas reinhardtii
2.3e-06
55.5
43
48.8
gene13369
Fragilariopsis cylindrus
2.3e-06
55.5
45
48.9
fso181870
Fistulifera solaris
2.3e-06
55.5
43
46.5
fso189760
Fistulifera solaris
2.3e-06
55.5
43
46.5
gsu76720
Galdieria sulphuraria
2.3e-06
55.5
48
45.8
gsu87600
Galdieria sulphuraria
2.3e-06
55.5
45
46.7
PSNMU-V1.4_AUG-EV-PASAV3_0116220
Pseudo-nitzschia multistriata
2.3e-06
55.5
42
52.4
Pp3c1_42450
Physcomitrella patens
2.3e-06
55.5
45
44.4
Pp3c5_17300
Physcomitrella patens
2.3e-06
55.5
45
42.2
pte129990
Paramecium tetraurelia
2.3e-06
55.5
45
48.9
sya00G118570
Synedra acus
2.3e-06
55.5
47
38.3
AT1G01650
Arabidopsis thaliana
3.0e-06
55.1
107
37.4
AT4G26400
Arabidopsis thaliana
3.0e-06
55.1
45
44.4
AT5G20910
Arabidopsis thaliana
3.0e-06
55.1
45
44.4
WBGene00019185
Caenorhabditis elegans
3.0e-06
55.1
45
46.7
Cre10.g422050
Chlamydomonas reinhardtii
3.0e-06
55.1
46
43.5
CC00G101710
Cyclotella cryptica
3.0e-06
55.1
45
51.1
Pp3c3_13100
Physcomitrella patens
3.0e-06
55.1
45
44.4
Pp3c5_4170
Physcomitrella patens
3.0e-06
55.1
45
55.6
SPAC3A12.03c
Schizosaccharomyces pombe
3.0e-06
55.1
47
44.7
AT1G35630
Arabidopsis thaliana
3.9e-06
54.7
43
46.5
AT1G45180
Arabidopsis thaliana
3.9e-06
54.7
44
45.5
AT3G19910
Arabidopsis thaliana
3.9e-06
54.7
45
46.7
gsu47620
Galdieria sulphuraria
3.9e-06
54.7
47
48.9
Pp3c11_26010
Physcomitrella patens
3.9e-06
54.7
44
43.2
ptri87800
Phaeodactylum tricornutum
3.9e-06
54.7
62
35.5
AT1G18780
Arabidopsis thaliana
5.1e-06
54.3
46
43.5
AT2G43070
Arabidopsis thaliana
5.1e-06
54.3
122
31.1
AT2G44330
Arabidopsis thaliana
5.1e-06
54.3
45
46.7
Cre05.g242856
Chlamydomonas reinhardtii
5.1e-06
54.3
110
34.5
Ec-25_001720
Ectocarpus siliculosus
5.1e-06
54.3
103
37.9
tps186000
Thalassiosira pseudonana
5.1e-06
54.3
43
51.2
AT3G46620
Arabidopsis thaliana
6.7e-06
53.9
45
46.7
AT3G47990
Arabidopsis thaliana
6.7e-06
53.9
47
44.7
AT5G01980
Arabidopsis thaliana
6.7e-06
53.9
46
45.7
ccr125520
Chondrus crispus
6.7e-06
53.9
48
45.8
Cre06.g301600
Chlamydomonas reinhardtii
6.7e-06
53.9
90
41.1
emh324960
Emiliania huxleyi
6.7e-06
53.9
45
46.7
gene2858
Fragilariopsis cylindrus
6.7e-06
53.9
41
46.3
PSNMU-V1.4_AUG-EV-PASAV3_0068320
Pseudo-nitzschia multistriata
6.7e-06
53.9
45
46.7
Pp3c11_13800
Physcomitrella patens
6.7e-06
53.9
45
37.8
WBGene00020322
Caenorhabditis elegans
8.7e-06
53.5
88
34.1
CM19G00950
Cyanidioschyzon merolae
8.7e-06
53.5
45
46.7
Cre05.g242750
Chlamydomonas reinhardtii
8.7e-06
53.5
64
46.9
fso47170
Fistulifera solaris
8.7e-06
53.5
50
48.0
gsu22860
Galdieria sulphuraria
8.7e-06
53.5
35
60.0
gsu22880
Galdieria sulphuraria
8.7e-06
53.5
35
60.0
Naga_100041g3
Nannochloropsis gaditana
8.7e-06
53.5
62
40.3
Pp3c7_560
Physcomitrella patens
8.7e-06
53.5
44
45.5
ps00G81860
Pseudo-nitzschia multiseries
8.7e-06
53.5
45
44.4
ps00G92810
Pseudo-nitzschia multiseries
8.7e-06
53.5
60
43.3
ps00G103510
Pseudo-nitzschia multiseries
8.7e-06
53.5
43
48.8
sya00G270510
Synedra acus
8.7e-06
53.5
42
42.9
tho99500
Thalassiosira oceanica
8.7e-06
53.5
44
43.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (5 genes)
Thalassiosira pseudonana (5 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (8 genes)
Fistulifera solaris (17 genes)
Fragilariopsis cylindrus (7 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (13 genes)
Nannochloropsis gaditana (4 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (5 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (32 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (7 genes)
Emiliania huxleyi (8 genes)
Paramecium tetraurelia (6 genes)
Seminavis robusta (3 genes)
Synedra acus (7 genes)
Physcomitrella patens (15 genes)
Chlamydomonas reinhardtii (12 genes)
Pseudo-nitzschia multistriata (6 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing