Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-20_003870
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-20_003870
Ectocarpus siliculosus
0.0e+00
1717.2
1018
100.0
Naga_100001g52
Nannochloropsis gaditana
5.7e-81
304.3
706
32.4
ENSG00000130640
Homo sapiens
4.8e-72
274.6
376
41.5
Pp3c23_1190
Physcomitrella patens
1.3e-64
250.0
380
38.4
Pp3c8_20000
Physcomitrella patens
9.2e-63
243.8
379
37.5
Pp3c13_20568
Physcomitrella patens
1.5e-60
236.5
382
38.2
Pp3c13_20560
Physcomitrella patens
1.5e-60
236.5
382
38.2
AT5G17410
Arabidopsis thaliana
3.3e-60
235.3
379
38.0
FBgn0026430
Drosophila melanogaster
6.8e-50
201.1
379
31.9
pte710980
Paramecium tetraurelia
1.6e-46
189.9
368
30.2
PSNMU-V1.4_AUG-EV-PASAV3_0118550
Pseudo-nitzschia multistriata
6.8e-42
174.5
391
31.5
SPBC365.15
Schizosaccharomyces pombe
5.8e-41
171.4
419
29.8
ptri91750
Phaeodactylum tricornutum
8.3e-40
167.5
381
31.5
ps00G06430
Pseudo-nitzschia multiseries
1.1e-39
167.2
386
32.4
gene13733
Fragilariopsis cylindrus
2.7e-38
162.5
383
31.1
tps159260
Thalassiosira pseudonana
3.5e-38
162.2
336
33.6
fso119530
Fistulifera solaris
4.6e-38
161.8
381
32.0
fso30500
Fistulifera solaris
2.3e-37
159.5
383
31.1
CC00G57600
Cyclotella cryptica
3.0e-37
159.1
410
31.2
Sro50_g029000
Seminavis robusta
9.9e-33
144.1
392
30.4
gsu84670
Galdieria sulphuraria
1.6e-30
136.7
386
29.5
Cre12.g525500
Chlamydomonas reinhardtii
6.0e-30
134.8
431
27.1
sya00G73720
Synedra acus
1.3e-24
117.1
381
27.6
ENSG00000126216
Homo sapiens
1.3e-21
107.1
391
27.6
emh343880
Emiliania huxleyi
7.3e-20
101.3
199
36.2
emh289740
Emiliania huxleyi
7.3e-20
101.3
199
36.2
CM10G02580
Cyanidioschyzon merolae
2.0e-17
93.2
391
26.9
FBgn0035800
Drosophila melanogaster
2.0e-17
93.2
369
23.6
SPBC428.20c
Schizosaccharomyces pombe
4.8e-11
72.0
267
27.0
Naga_100060g14
Nannochloropsis gaditana
4.0e-10
68.9
221
28.5
pte316560
Paramecium tetraurelia
5.3e-10
68.6
392
23.2
pte73500
Paramecium tetraurelia
1.2e-09
67.4
278
23.4
pte263930
Paramecium tetraurelia
1.2e-09
67.4
383
23.5
ps00G07860
Pseudo-nitzschia multiseries
1.5e-09
67.0
307
22.8
pte344330
Paramecium tetraurelia
1.5e-09
67.0
278
23.4
Cre11.g467745
Chlamydomonas reinhardtii
4.5e-09
65.5
416
26.2
ptri173770
Phaeodactylum tricornutum
1.7e-08
63.5
388
22.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing