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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-20_000820
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-20_000820
Ectocarpus siliculosus
3.8e-85
315.5
155
100.0
AT3G05210
Arabidopsis thaliana
8.8e-26
118.2
129
48.8
Pp3c6_29610
Physcomitrella patens
4.4e-25
115.9
129
46.5
ENSG00000012061
Homo sapiens
1.1e-23
111.3
119
48.7
tps172830
Thalassiosira pseudonana
3.1e-23
109.8
144
43.8
CC00G30270
Cyclotella cryptica
9.1e-23
108.2
154
40.3
Cre03.g196651
Chlamydomonas reinhardtii
2.0e-22
107.1
141
44.0
sya00G224110
Synedra acus
5.5e-20
99.0
114
45.6
sya00G69580
Synedra acus
7.2e-20
98.6
114
45.6
ptri107800
Phaeodactylum tricornutum
9.5e-20
98.2
115
44.3
tho219460
Thalassiosira oceanica
3.6e-19
96.3
110
43.6
SPBC4F6.15c
Schizosaccharomyces pombe
8.0e-19
95.1
105
43.8
gsu52420
Galdieria sulphuraria
1.5e-17
90.9
119
35.3
ccr134080
Chondrus crispus
2.6e-17
90.1
111
40.5
AA0016G00460
Aureococcus anophagefferens
5.7e-17
89.0
103
45.6
Sro414_g138280
Seminavis robusta
7.5e-17
88.6
119
42.0
ps00G153650
Pseudo-nitzschia multiseries
8.3e-16
85.1
135
40.0
PSNMU-V1.4_AUG-EV-PASAV3_0037520
Pseudo-nitzschia multistriata
2.0e-14
80.5
113
40.7
gene11648
Fragilariopsis cylindrus
2.5e-12
73.6
125
35.2
fso100040
Fistulifera solaris
1.6e-11
70.9
110
37.3
FBgn0028434
Drosophila melanogaster
2.1e-11
70.5
111
31.5
fso154870
Fistulifera solaris
2.8e-11
70.1
110
37.3
emh773420
Emiliania huxleyi
3.6e-11
69.7
110
39.1
CM07G00790
Cyanidioschyzon merolae
3.5e-06
53.1
107
31.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing