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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-20_000660
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-20_000660
Ectocarpus siliculosus
5.3e-236
818.1
398
100.0
CC00G32390
Cyclotella cryptica
2.3e-82
307.8
351
47.9
Sro1597_g284850
Seminavis robusta
4.5e-78
293.5
366
45.6
ps00G32980
Pseudo-nitzschia multiseries
3.2e-76
287.3
350
46.0
tps190320
Thalassiosira pseudonana
7.9e-75
282.7
309
48.5
AA0008G00150
Aureococcus anophagefferens
1.0e-74
282.3
332
46.4
sya00G65150
Synedra acus
7.4e-73
276.2
358
44.4
PSNMU-V1.4_AUG-EV-PASAV3_0092630
Pseudo-nitzschia multistriata
1.8e-71
271.6
373
44.5
ptri222860
Phaeodactylum tricornutum
1.1e-68
262.3
347
43.5
fso123310
Fistulifera solaris
2.3e-66
254.6
352
43.2
Naga_100311g1
Nannochloropsis gaditana
7.0e-63
243.0
390
39.2
CM12G02490
Cyanidioschyzon merolae
2.9e-61
237.7
332
42.2
gene16590
Fragilariopsis cylindrus
6.5e-61
236.5
372
39.8
ENSG00000114026
Homo sapiens
6.8e-58
226.5
331
39.0
Pp3c15_7530
Physcomitrella patens
9.8e-57
222.6
362
39.0
AT1G21710
Arabidopsis thaliana
9.1e-55
216.1
330
39.7
Cre01.g063632
Chlamydomonas reinhardtii
3.8e-53
210.7
418
34.2
gsu49240
Galdieria sulphuraria
3.5e-46
187.6
327
34.6
YML060W
Saccharomyces cerevisiae strain S288C
7.8e-38
159.8
351
33.6
FBgn0027864
Drosophila melanogaster
1.8e-34
148.7
323
29.4
emh279700
Emiliania huxleyi
5.2e-34
147.1
270
37.4
emh650340
Emiliania huxleyi
2.4e-31
138.3
330
31.2
emh36380
Emiliania huxleyi
3.3e-28
127.9
139
49.6
ccr148440
Chondrus crispus
5.6e-28
127.1
151
49.0
tho590480
Thalassiosira oceanica
4.7e-11
70.9
42
71.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing