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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-17_003700
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-17_003700
Ectocarpus siliculosus
3.1e-251
869.0
540
100.0
Naga_100108g10
Nannochloropsis gaditana
1.8e-94
348.2
247
67.6
SPAC1F7.05
Schizosaccharomyces pombe
4.5e-85
317.0
241
61.8
YER070W
Saccharomyces cerevisiae strain S288C
1.3e-84
315.5
241
60.6
sya00G221940
Synedra acus
1.7e-84
315.1
242
60.3
ENSG00000167325
Homo sapiens
7.2e-83
309.7
241
58.5
Cre12.g492950
Chlamydomonas reinhardtii
1.6e-82
308.5
265
55.8
YIL066C
Saccharomyces cerevisiae strain S288C
1.6e-82
308.5
241
58.1
Naga_100034g6
Nannochloropsis gaditana
2.7e-82
307.8
237
60.8
Sro399_g134840
Seminavis robusta
2.7e-82
307.8
277
52.0
AA0009G03050
Aureococcus anophagefferens
3.6e-82
307.4
237
60.8
AA0016G01460
Aureococcus anophagefferens
3.6e-82
307.4
237
60.3
AA0021G00710
Aureococcus anophagefferens
3.6e-82
307.4
279
54.1
AA0006G00950
Aureococcus anophagefferens
4.7e-82
307.0
237
60.3
Ec-21_002920
Ectocarpus siliculosus
1.8e-81
305.1
237
61.2
ptri219800
Phaeodactylum tricornutum
2.3e-81
304.7
242
57.9
PSNMU-V1.4_AUG-EV-PASAV3_0005380
Pseudo-nitzschia multistriata
8.8e-81
302.8
242
59.1
ps00G07360
Pseudo-nitzschia multiseries
1.1e-80
302.4
242
58.7
Pp3c5_8430
Physcomitrella patens
2.0e-80
301.6
241
57.7
Pp3c6_14810
Physcomitrella patens
1.7e-79
298.5
241
56.4
WBGene00004391
Caenorhabditis elegans
2.2e-79
298.1
242
57.9
AT2G21790
Arabidopsis thaliana
6.3e-79
296.6
241
57.3
gsu84250
Galdieria sulphuraria
8.2e-79
296.2
241
59.8
gene13281
Fragilariopsis cylindrus
2.4e-78
294.7
242
56.6
CM13G03230
Cyanidioschyzon merolae
1.7e-76
288.5
239
61.5
ccr33860
Chondrus crispus
2.2e-76
288.1
239
59.4
fso18700
Fistulifera solaris
1.5e-75
285.4
241
54.8
fso45240
Fistulifera solaris
1.5e-75
285.4
241
54.8
tps128970
Thalassiosira pseudonana
1.5e-75
285.4
241
53.9
gene2100
Fragilariopsis cylindrus
9.4e-75
282.7
236
55.9
CC00G39370
Cyclotella cryptica
3.6e-74
280.8
241
52.3
Ec-06_005120
Ectocarpus siliculosus
4.0e-73
277.3
238
53.8
pte663260
Paramecium tetraurelia
4.8e-71
270.4
240
53.8
FBgn0011703
Drosophila melanogaster
2.4e-70
268.1
241
51.9
tho73320
Thalassiosira oceanica
2.7e-61
238.0
216
51.9
sya00G162990
Synedra acus
4.5e-61
237.3
246
51.2
ptri146410
Phaeodactylum tricornutum
1.7e-60
235.3
254
49.6
tps144930
Thalassiosira pseudonana
3.4e-56
221.1
243
47.7
tho107100
Thalassiosira oceanica
4.9e-55
217.2
264
45.5
ps00G68260
Pseudo-nitzschia multiseries
2.0e-53
211.8
264
43.6
gene6322
Fragilariopsis cylindrus
2.5e-51
204.9
223
49.3
fso30680
Fistulifera solaris
4.3e-51
204.1
236
44.9
PSNMU-V1.4_AUG-EV-PASAV3_0064210
Pseudo-nitzschia multistriata
1.0e-49
199.5
223
48.4
emh680610
Emiliania huxleyi
8.3e-47
189.9
229
42.8
emh48490
Emiliania huxleyi
8.3e-47
189.9
229
42.8
Sro785_g202090
Seminavis robusta
3.2e-46
188.0
258
41.1
fso119370
Fistulifera solaris
6.6e-44
180.3
196
48.0
AA0009G03030
Aureococcus anophagefferens
8.6e-44
179.9
149
56.4
CC00G109190
Cyclotella cryptica
1.9e-43
178.7
270
39.6
ps00G85260
Pseudo-nitzschia multiseries
1.7e-36
155.6
132
55.3
pte753360
Paramecium tetraurelia
8.1e-34
146.7
158
48.1
emh07130
Emiliania huxleyi
7.1e-30
133.7
128
52.3
Ec-11_002180
Ectocarpus siliculosus
5.6e-27
124.0
85
65.9
AA0644G00010
Aureococcus anophagefferens
8.9e-25
116.7
79
67.1
emh517290
Emiliania huxleyi
9.3e-22
106.7
87
57.5
Ec-11_002170
Ectocarpus siliculosus
6.4e-15
84.0
56
64.3
gsu05760
Galdieria sulphuraria
2.4e-14
82.0
122
37.7
emh551450
Emiliania huxleyi
3.0e-12
75.1
43
72.1
pte753340
Paramecium tetraurelia
8.1e-10
67.0
49
59.2
AA0040G00610
Aureococcus anophagefferens
6.4e-07
57.4
71
45.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (7 genes)
Ectocarpus siliculosus (5 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing