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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-15_001940
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-15_001940
Ectocarpus siliculosus
0.0e+00
1380.2
705
100.0
Ec-01_011350
Ectocarpus siliculosus
8.1e-182
639.4
487
67.6
Ec-01_011390
Ectocarpus siliculosus
5.6e-175
616.7
484
66.5
Ec-16_003960
Ectocarpus siliculosus
7.1e-170
599.7
489
64.0
Ec-08_001200
Ectocarpus siliculosus
4.0e-157
557.4
733
47.1
Ec-08_001220
Ectocarpus siliculosus
5.7e-87
324.3
262
63.4
Ec-25_000110
Ectocarpus siliculosus
3.2e-77
292.0
490
38.6
Ec-06_000020
Ectocarpus siliculosus
3.0e-75
285.4
709
32.7
Ec-01_012020
Ectocarpus siliculosus
8.0e-73
277.3
490
39.2
Ec-26_003170
Ectocarpus siliculosus
2.6e-39
166.0
296
37.2
Ec-26_002110
Ectocarpus siliculosus
3.5e-36
155.6
192
46.9
Ec-22_003800
Ectocarpus siliculosus
2.8e-25
119.4
491
25.1
Ec-06_003200
Ectocarpus siliculosus
1.5e-23
113.6
482
26.8
Ec-22_003510
Ectocarpus siliculosus
3.8e-22
109.0
498
25.1
Ec-22_003500
Ectocarpus siliculosus
3.8e-22
109.0
498
25.1
Ec-22_003600
Ectocarpus siliculosus
5.5e-21
105.1
508
25.2
Ec-01_011280
Ectocarpus siliculosus
1.2e-20
104.0
216
34.3
Ec-00_009360
Ectocarpus siliculosus
3.0e-19
99.4
491
23.6
Ec-04_001460
Ectocarpus siliculosus
8.7e-19
97.8
469
24.7
Ec-04_001450
Ectocarpus siliculosus
8.7e-19
97.8
469
24.7
ENSG00000120868
Homo sapiens
4.8e-17
92.0
313
26.8
Ec-08_004230
Ectocarpus siliculosus
2.6e-15
86.3
490
25.3
Ec-01_005180
Ectocarpus siliculosus
2.9e-14
82.8
407
25.6
Ec-22_003590
Ectocarpus siliculosus
3.8e-14
82.4
259
27.0
ccr66760
Chondrus crispus
1.1e-13
80.9
348
23.9
Ec-08_001010
Ectocarpus siliculosus
1.1e-13
80.9
397
26.4
Ec-06_007470
Ectocarpus siliculosus
1.2e-12
77.4
255
29.0
Ec-24_002630
Ectocarpus siliculosus
2.3e-11
73.2
483
24.4
AT3G07040
Arabidopsis thaliana
5.1e-11
72.0
326
25.8
ccr103260
Chondrus crispus
8.8e-11
71.2
333
27.3
ccr185700
Chondrus crispus
8.8e-11
71.2
367
25.1
ccr54060
Chondrus crispus
2.5e-10
69.7
394
25.1
ccr192620
Chondrus crispus
2.5e-10
69.7
331
26.0
ccr33240
Chondrus crispus
3.3e-10
69.3
385
24.4
ccr51900
Chondrus crispus
3.3e-10
69.3
385
24.4
ccr51840
Chondrus crispus
7.4e-10
68.2
383
24.0
ccr52300
Chondrus crispus
9.7e-10
67.8
330
24.8
Ec-07_000970
Ectocarpus siliculosus
9.7e-10
67.8
394
24.1
ccr53460
Chondrus crispus
1.3e-09
67.4
330
24.5
ccr193200
Chondrus crispus
1.3e-09
67.4
392
23.0
Ec-03_002580
Ectocarpus siliculosus
1.3e-09
67.4
125
38.4
ccr36540
Chondrus crispus
1.7e-09
67.0
330
24.8
ccr192520
Chondrus crispus
1.7e-09
67.0
330
24.8
AT1G50180
Arabidopsis thaliana
3.1e-08
62.8
403
22.3
Ec-24_003000
Ectocarpus siliculosus
3.1e-08
62.8
253
25.3
ccr186000
Chondrus crispus
4.1e-08
62.4
366
23.2
AT1G59620
Arabidopsis thaliana
5.3e-08
62.0
227
26.0
fso18030
Fistulifera solaris
6.9e-08
61.6
292
25.3
ccr14520
Chondrus crispus
9.1e-08
61.2
352
26.1
fso45160
Fistulifera solaris
9.1e-08
61.2
292
25.3
ccr33360
Chondrus crispus
1.5e-07
60.5
298
23.2
AT5G40910
Arabidopsis thaliana
3.4e-07
59.3
184
26.1
Ec-19_000010
Ectocarpus siliculosus
3.8e-06
55.8
51
51.0
Ec-15_004740
Ectocarpus siliculosus
8.5e-06
54.7
35
77.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (31 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (16 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing