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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-14_003870
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-14_003870
Ectocarpus siliculosus
0.0e+00
1437.2
964
100.0
Naga_100112g19
Nannochloropsis gaditana
1.5e-59
233.0
604
30.6
AA0047G00240
Aureococcus anophagefferens
7.6e-59
230.7
465
31.4
tho374620
Thalassiosira oceanica
9.9e-59
230.3
284
44.7
tho432140
Thalassiosira oceanica
9.9e-59
230.3
284
44.7
sya00G228890
Synedra acus
1.1e-57
226.9
289
41.9
CC00G165650
Cyclotella cryptica
3.5e-56
221.9
264
45.1
ptri38840
Phaeodactylum tricornutum
8.7e-55
217.2
470
31.9
FBgn0035916
Drosophila melanogaster
4.3e-54
214.9
508
28.9
ENSG00000107021
Homo sapiens
5.6e-54
214.5
326
38.3
tps19310
Thalassiosira pseudonana
1.6e-53
213.0
191
53.4
Pp3c24_6830
Physcomitrella patens
8.1e-53
210.7
463
30.5
Pp3c8_10390
Physcomitrella patens
2.4e-52
209.1
463
30.0
Sro483_g152060
Seminavis robusta
9.0e-52
207.2
492
30.5
WBGene00009726
Caenorhabditis elegans
5.1e-47
191.4
342
31.9
AT4G13730
Arabidopsis thaliana
3.3e-46
188.7
496
27.8
Cre03.g195700
Chlamydomonas reinhardtii
1.3e-42
176.8
272
35.7
ps00G97830
Pseudo-nitzschia multiseries
1.9e-41
172.9
255
40.8
AT1G04830
Arabidopsis thaliana
7.1e-41
171.0
460
25.7
PSNMU-V1.4_AUG-EV-PASAV3_0084050
Pseudo-nitzschia multistriata
9.3e-41
170.6
310
35.8
SPAC1952.17c
Schizosaccharomyces pombe
3.9e-39
165.2
470
28.9
pte694530
Paramecium tetraurelia
2.5e-38
162.5
270
31.5
gene11920
Fragilariopsis cylindrus
1.8e-36
156.4
258
37.2
emh362800
Emiliania huxleyi
1.7e-34
149.8
248
36.3
pte694790
Paramecium tetraurelia
1.8e-28
129.8
273
30.0
pte289260
Paramecium tetraurelia
2.5e-25
119.4
183
30.6
pte169190
Paramecium tetraurelia
1.6e-24
116.7
182
30.8
pte499300
Paramecium tetraurelia
1.6e-24
116.7
271
29.2
pte678450
Paramecium tetraurelia
3.6e-24
115.5
271
28.4
FBgn0038129
Drosophila melanogaster
3.7e-21
105.5
293
26.3
WBGene00007167
Caenorhabditis elegans
1.8e-20
103.2
304
25.7
ENSG00000131374
Homo sapiens
2.6e-19
99.4
291
26.5
ccr96380
Chondrus crispus
2.2e-18
96.3
200
32.5
ccr134600
Chondrus crispus
9.4e-17
90.9
214
31.3
gsu116860
Galdieria sulphuraria
2.1e-16
89.7
235
28.1
CM20G03540
Cyanidioschyzon merolae
3.6e-16
89.0
175
30.3
gene6293
Fragilariopsis cylindrus
7.9e-16
87.8
199
28.1
ps00G170430
Pseudo-nitzschia multiseries
5.2e-15
85.1
199
28.1
Cre12.g486400
Chlamydomonas reinhardtii
8.8e-15
84.3
215
28.8
FBgn0038855
Drosophila melanogaster
8.8e-15
84.3
220
28.6
ENSG00000065491
Homo sapiens
1.1e-14
84.0
190
30.5
PSNMU-V1.4_AUG-EV-PASAV3_0060250
Pseudo-nitzschia multistriata
2.0e-14
83.2
196
27.0
tps05390
Thalassiosira pseudonana
5.7e-14
81.6
195
27.2
gsu63080
Galdieria sulphuraria
7.4e-14
81.3
216
27.8
sya00G162590
Synedra acus
1.3e-13
80.5
227
27.3
tho134520
Thalassiosira oceanica
1.3e-13
80.5
195
27.7
Pp3c13_11070
Physcomitrella patens
4.8e-13
78.6
266
26.3
ENSG00000054611
Homo sapiens
8.2e-13
77.8
216
30.1
pte410710
Paramecium tetraurelia
8.2e-13
77.8
170
25.9
CC00G117860
Cyclotella cryptica
1.4e-12
77.0
189
26.5
emh339350
Emiliania huxleyi
1.4e-12
77.0
228
25.9
ptri146270
Phaeodactylum tricornutum
1.4e-12
77.0
236
25.8
AT2G30710
Arabidopsis thaliana
2.4e-12
76.3
189
27.5
Ec-27_002980
Ectocarpus siliculosus
2.4e-12
76.3
189
28.0
fso60810
Fistulifera solaris
1.6e-11
73.6
225
25.8
WBGene00009322
Caenorhabditis elegans
2.0e-11
73.2
192
29.2
Pp3c9_25750
Physcomitrella patens
3.5e-11
72.4
186
28.0
pte251670
Paramecium tetraurelia
3.5e-11
72.4
239
25.5
fso172830
Fistulifera solaris
4.5e-11
72.0
225
24.0
Pp3c26_10860
Physcomitrella patens
4.5e-11
72.0
140
30.7
YOR070C
Saccharomyces cerevisiae strain S288C
1.3e-10
70.5
151
27.2
AT4G28550
Arabidopsis thaliana
2.9e-10
69.3
226
26.5
pte382560
Paramecium tetraurelia
3.8e-10
68.9
239
25.5
gsu47640
Galdieria sulphuraria
5.0e-10
68.6
241
25.7
ENSG00000167291
Homo sapiens
5.0e-10
68.6
172
26.7
pte492990
Paramecium tetraurelia
6.5e-10
68.2
260
23.1
ENSG00000104946
Homo sapiens
1.1e-09
67.4
173
26.6
AT3G59570
Arabidopsis thaliana
3.2e-09
65.9
140
28.6
CM11G00280
Cyanidioschyzon merolae
5.5e-09
65.1
160
28.1
pte155900
Paramecium tetraurelia
9.4e-09
64.3
261
22.2
AT2G20440
Arabidopsis thaliana
1.2e-08
63.9
136
28.7
FBgn0029736
Drosophila melanogaster
1.2e-08
63.9
180
25.6
Sro518_g158780
Seminavis robusta
2.1e-08
63.2
250
22.4
ENSG00000121749
Homo sapiens
2.7e-08
62.8
175
24.0
Pp3c3_9290
Physcomitrella patens
3.6e-08
62.4
138
31.2
Cre12.g537750
Chlamydomonas reinhardtii
8.0e-08
61.2
161
24.8
Naga_100018g31
Nannochloropsis gaditana
1.0e-07
60.8
150
29.3
AA0001G02640
Aureococcus anophagefferens
1.4e-07
60.5
194
24.2
AT2G19240
Arabidopsis thaliana
1.4e-07
60.5
174
30.5
pte103010
Paramecium tetraurelia
1.4e-07
60.5
266
21.8
Pp3c11_21180
Physcomitrella patens
1.8e-07
60.1
177
27.7
pte350810
Paramecium tetraurelia
1.8e-07
60.1
291
22.3
pte442640
Paramecium tetraurelia
3.0e-07
59.3
164
27.4
AT4G29950
Arabidopsis thaliana
4.0e-07
58.9
158
31.0
pte394980
Paramecium tetraurelia
4.0e-07
58.9
290
23.1
AT3G07890
Arabidopsis thaliana
5.2e-07
58.5
176
24.4
gsu16350
Galdieria sulphuraria
5.2e-07
58.5
143
30.1
pte762530
Paramecium tetraurelia
5.2e-07
58.5
168
26.2
pte577330
Paramecium tetraurelia
6.7e-07
58.2
161
26.7
Pp3c20_14740
Physcomitrella patens
8.8e-07
57.8
201
22.4
Pp3c18_4400
Physcomitrella patens
1.2e-06
57.4
186
24.2
AT5G57210
Arabidopsis thaliana
2.0e-06
56.6
192
26.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (10 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (17 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (9 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing