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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-11_000550
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-11_000550
Ectocarpus siliculosus
0.0e+00
1970.3
1129
100.0
Naga_100445g1
Nannochloropsis gaditana
1.9e-117
425.6
563
41.7
ptri190020
Phaeodactylum tricornutum
1.1e-114
416.4
518
44.2
AT5G39840
Arabidopsis thaliana
4.3e-114
414.5
537
41.3
PSNMU-V1.4_AUG-EV-PASAV3_0048960
Pseudo-nitzschia multistriata
5.3e-112
407.5
569
40.1
gene1104
Fragilariopsis cylindrus
2.2e-110
402.1
500
42.8
Pp3c11_24680
Physcomitrella patens
1.4e-109
399.4
531
39.4
ps00G135460
Pseudo-nitzschia multiseries
4.2e-109
397.9
533
42.0
Sro345_g122490
Seminavis robusta
5.5e-109
397.5
536
42.4
sya00G151810
Synedra acus
2.7e-108
395.2
521
41.8
AA0012G01140
Aureococcus anophagefferens
1.1e-104
383.3
490
44.1
CC00G47930
Cyclotella cryptica
3.1e-104
381.7
572
38.1
tps94420
Thalassiosira pseudonana
2.2e-102
375.6
521
40.1
gsu141650
Galdieria sulphuraria
5.2e-99
364.4
518
39.4
tho295100
Thalassiosira oceanica
8.8e-99
363.6
399
47.6
gene8944
Fragilariopsis cylindrus
7.4e-98
360.5
328
53.7
AT4G14790
Arabidopsis thaliana
1.4e-83
313.2
512
36.5
gsu110850
Galdieria sulphuraria
3.0e-83
312.0
544
34.0
ENSG00000156502
Homo sapiens
2.6e-82
308.9
518
35.5
Naga_100019g77
Nannochloropsis gaditana
8.3e-81
303.9
509
36.5
WBGene00007444
Caenorhabditis elegans
1.7e-78
296.2
539
35.6
SPAC637.11
Schizosaccharomyces pombe
3.8e-78
295.0
528
34.8
FBgn0037232
Drosophila melanogaster
8.6e-78
293.9
518
35.5
CM16G01410
Cyanidioschyzon merolae
1.5e-69
266.5
757
28.7
YPL029W
Saccharomyces cerevisiae strain S288C
1.8e-67
259.6
524
33.8
Cre06.g270900
Chlamydomonas reinhardtii
8.7e-38
161.0
633
23.9
AA0016G01420
Aureococcus anophagefferens
3.0e-22
109.4
309
30.4
ps00G40990
Pseudo-nitzschia multiseries
3.0e-22
109.4
254
31.5
sya00G127370
Synedra acus
1.5e-21
107.1
294
29.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing