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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-09_003740
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-09_003740
Ectocarpus siliculosus
0.0e+00
1662.5
1148
100.0
fso118150
Fistulifera solaris
9.4e-152
539.7
629
46.3
Sro9_g007280
Seminavis robusta
2.6e-149
531.6
625
46.7
CC00G70010
Cyclotella cryptica
5.7e-149
530.4
618
47.1
ptri207070
Phaeodactylum tricornutum
2.2e-148
528.5
635
45.0
gene8568
Fragilariopsis cylindrus
1.5e-144
515.8
638
44.5
ps00G137330
Pseudo-nitzschia multiseries
6.8e-142
506.9
519
48.4
tho208880
Thalassiosira oceanica
1.2e-135
486.1
560
46.8
tps125950
Thalassiosira pseudonana
9.8e-133
476.5
525
48.8
Pp3c2_1760
Physcomitrella patens
4.0e-118
427.9
513
42.9
fso15850
Fistulifera solaris
6.4e-116
420.6
387
54.5
AT1G60930
Arabidopsis thaliana
1.1e-112
409.8
523
41.5
AT1G10930
Arabidopsis thaliana
9.5e-112
406.8
513
41.9
FBgn0002906
Drosophila melanogaster
3.5e-106
388.3
504
40.9
YMR190C
Saccharomyces cerevisiae strain S288C
4.3e-104
381.3
513
39.4
Cre04.g219750
Chlamydomonas reinhardtii
5.6e-104
380.9
521
41.3
SPAC2G11.12
Schizosaccharomyces pombe
2.6e-101
372.1
525
40.2
ENSG00000197299
Homo sapiens
3.4e-101
371.7
516
40.7
Pp3c5_19440
Physcomitrella patens
2.9e-100
368.6
539
41.4
AT3G05740
Arabidopsis thaliana
6.0e-98
360.9
415
45.3
WBGene00001865
Caenorhabditis elegans
7.8e-98
360.5
525
39.2
AT1G31360
Arabidopsis thaliana
6.6e-97
357.5
504
40.9
ccr124140
Chondrus crispus
1.5e-96
356.3
554
37.7
Cre12.g502350
Chlamydomonas reinhardtii
5.6e-96
354.4
583
38.3
ENSG00000004700
Homo sapiens
1.1e-94
350.1
516
37.8
Ec-16_000130
Ectocarpus siliculosus
3.1e-94
348.6
430
43.3
CM01G00930
Cyanidioschyzon merolae
8.4e-92
340.5
467
43.0
Cre03.g178950
Chlamydomonas reinhardtii
1.6e-90
336.3
425
44.7
WBGene00019334
Caenorhabditis elegans
5.6e-88
327.8
448
40.4
AA0006G04330
Aureococcus anophagefferens
1.8e-86
322.8
424
40.3
AT4G35740
Arabidopsis thaliana
2.9e-84
315.5
413
41.2
Naga_100004g93
Nannochloropsis gaditana
4.9e-84
314.7
431
41.5
pte81880
Paramecium tetraurelia
1.8e-81
306.2
413
39.5
PSNMU-V1.4_AUG-EV-PASAV3_0006490
Pseudo-nitzschia multistriata
1.9e-80
302.8
473
39.5
ps00G143410
Pseudo-nitzschia multiseries
1.9e-80
302.8
408
42.9
emh380110
Emiliania huxleyi
1.8e-78
296.2
325
49.2
gsu100710
Galdieria sulphuraria
1.4e-75
286.6
322
46.6
fso198320
Fistulifera solaris
2.5e-75
285.8
457
38.9
ptri69230
Phaeodactylum tricornutum
4.2e-75
285.0
465
38.1
Pp3c12_1610
Physcomitrella patens
5.5e-75
284.6
448
38.8
gene10976
Fragilariopsis cylindrus
9.3e-75
283.9
366
41.5
gsu56420
Galdieria sulphuraria
2.7e-74
282.3
424
38.4
AA0004G00970
Aureococcus anophagefferens
1.0e-73
280.4
419
40.3
Ec-12_006470
Ectocarpus siliculosus
1.8e-73
279.6
469
36.7
Cre16.g673393
Chlamydomonas reinhardtii
3.9e-73
278.5
436
38.8
fso24210
Fistulifera solaris
3.9e-73
278.5
505
36.4
sya00G48920
Synedra acus
3.9e-73
278.5
554
33.8
Cre12.g490150
Chlamydomonas reinhardtii
6.7e-73
277.7
484
34.3
emh318930
Emiliania huxleyi
5.7e-72
274.6
419
39.9
emh463360
Emiliania huxleyi
1.6e-71
273.1
419
39.9
Sro2203_g318940
Seminavis robusta
4.8e-71
271.6
373
42.4
tho148240
Thalassiosira oceanica
1.1e-70
270.4
497
35.2
tps116000
Thalassiosira pseudonana
1.8e-70
269.6
374
40.6
FBgn0027375
Drosophila melanogaster
3.1e-70
268.9
446
39.0
fso54780
Fistulifera solaris
4.1e-70
268.5
446
36.5
Sro408_g136820
Seminavis robusta
4.1e-70
268.5
482
35.5
ENSG00000108469
Homo sapiens
5.3e-70
268.1
437
37.3
CC00G164170
Cyclotella cryptica
1.5e-69
266.5
541
34.4
Naga_100003g38
Nannochloropsis gaditana
2.0e-69
266.2
494
35.4
Ec-28_002030
Ectocarpus siliculosus
1.3e-68
263.5
467
35.3
ENSG00000165392
Homo sapiens
1.3e-68
263.5
519
33.7
tho246440
Thalassiosira oceanica
1.7e-68
263.1
456
37.3
sya00G42410
Synedra acus
2.2e-68
262.7
431
38.1
ptri228290
Phaeodactylum tricornutum
2.9e-68
262.3
446
36.5
fso06000
Fistulifera solaris
3.8e-68
261.9
449
36.5
emh535300
Emiliania huxleyi
1.9e-67
259.6
342
45.0
sya00G103540
Synedra acus
1.9e-67
259.6
506
35.4
ptri113260
Phaeodactylum tricornutum
2.7e-66
255.8
459
35.5
ccr71700
Chondrus crispus
1.3e-65
253.4
520
32.1
Naga_101513g1
Nannochloropsis gaditana
1.3e-65
253.4
182
65.9
sya00G178700
Synedra acus
2.3e-65
252.7
360
41.9
ps00G171480
Pseudo-nitzschia multiseries
3.0e-65
252.3
481
33.7
ps00G126930
Pseudo-nitzschia multiseries
5.1e-65
251.5
477
35.2
fso33860
Fistulifera solaris
1.5e-64
250.0
482
34.6
PSNMU-V1.4_AUG-EV-PASAV3_0090070
Pseudo-nitzschia multistriata
1.9e-64
249.6
427
36.3
WBGene00004322
Caenorhabditis elegans
2.5e-64
249.2
445
36.9
emh472900
Emiliania huxleyi
2.5e-64
249.2
346
42.2
fso186800
Fistulifera solaris
2.5e-64
249.2
460
36.5
PSNMU-V1.4_AUG-EV-PASAV3_0014870
Pseudo-nitzschia multistriata
7.4e-64
247.7
474
34.2
WBGene00006944
Caenorhabditis elegans
1.1e-62
243.8
430
35.6
sya00G17260
Synedra acus
4.1e-62
241.9
446
35.7
Naga_100005g115
Nannochloropsis gaditana
6.9e-62
241.1
404
36.9
ccr118120
Chondrus crispus
9.1e-62
240.7
417
35.3
CC00G78410
Cyclotella cryptica
2.6e-61
239.2
525
31.2
Sro83_g044440
Seminavis robusta
4.5e-61
238.4
452
33.8
gene15285
Fragilariopsis cylindrus
5.9e-61
238.0
448
35.9
tps227990
Thalassiosira pseudonana
7.7e-61
237.7
489
32.5
tho400420
Thalassiosira oceanica
6.5e-60
234.6
287
44.6
emh224220
Emiliania huxleyi
4.2e-59
231.9
331
38.4
emh417420
Emiliania huxleyi
1.8e-57
226.5
409
35.5
gsu128920
Galdieria sulphuraria
4.4e-56
221.9
361
35.5
AA0010G01940
Aureococcus anophagefferens
5.7e-56
221.5
356
38.5
sya00G178710
Synedra acus
8.2e-55
217.6
223
51.1
emh201700
Emiliania huxleyi
2.4e-54
216.1
450
32.2
emh108380
Emiliania huxleyi
2.4e-54
216.1
450
32.2
pte222410
Paramecium tetraurelia
2.0e-53
213.0
323
35.9
CC00G96900
Cyclotella cryptica
1.0e-52
210.7
469
31.8
CM04G01230
Cyanidioschyzon merolae
2.9e-52
209.1
392
35.7
sya00G90620
Synedra acus
2.1e-50
203.0
365
33.7
Ec-19_003700
Ectocarpus siliculosus
6.1e-50
201.4
353
35.1
tps185260
Thalassiosira pseudonana
6.1e-50
201.4
304
40.5
AT5G27680
Arabidopsis thaliana
1.8e-49
199.9
548
29.0
Ec-28_000690
Ectocarpus siliculosus
1.8e-49
199.9
288
37.5
Naga_100027g41
Nannochloropsis gaditana
1.1e-48
197.2
382
34.3
Pp3c11_4840
Physcomitrella patens
1.5e-48
196.8
361
33.0
AT1G27880
Arabidopsis thaliana
8.2e-47
191.0
370
31.1
sya00G48720
Synedra acus
1.1e-46
190.7
320
37.5
sya00G197840
Synedra acus
1.4e-46
190.3
401
32.7
FBgn0040290
Drosophila melanogaster
7.0e-46
188.0
426
31.9
fso174250
Fistulifera solaris
1.0e-44
184.1
399
32.6
Pp3c20_2130
Physcomitrella patens
4.2e-43
178.7
578
26.6
fso140850
Fistulifera solaris
2.7e-42
176.0
401
32.4
CC00G101890
Cyclotella cryptica
8.0e-42
174.5
404
31.4
ccr114320
Chondrus crispus
4.0e-41
172.2
390
32.3
emh685360
Emiliania huxleyi
4.0e-41
172.2
360
31.4
tps76850
Thalassiosira pseudonana
4.0e-41
172.2
346
33.8
ENSG00000160957
Homo sapiens
5.2e-41
171.8
353
33.7
tho89260
Thalassiosira oceanica
7.5e-40
167.9
377
31.3
ps00G87070
Pseudo-nitzschia multiseries
8.2e-39
164.5
383
30.0
gene8024
Fragilariopsis cylindrus
1.8e-38
163.3
348
33.0
Pp3c23_17960
Physcomitrella patens
2.4e-38
162.9
500
29.0
ptri93310
Phaeodactylum tricornutum
2.7e-37
159.5
370
30.8
PSNMU-V1.4_AUG-EV-PASAV3_0073870
Pseudo-nitzschia multistriata
2.5e-35
152.9
377
30.0
Sro108_g054090
Seminavis robusta
4.2e-35
152.1
385
31.2
tho230080
Thalassiosira oceanica
1.0e-33
147.5
326
32.2
ccr19820
Chondrus crispus
5.2e-33
145.2
422
31.0
pte369180
Paramecium tetraurelia
5.2e-33
145.2
355
30.7
ccr75680
Chondrus crispus
9.1e-30
134.4
364
29.9
ccr52080
Chondrus crispus
2.0e-29
133.3
364
29.7
ccr89160
Chondrus crispus
2.7e-29
132.9
364
29.7
ccr11720
Chondrus crispus
3.5e-29
132.5
364
29.7
ccr09320
Chondrus crispus
4.5e-29
132.1
364
29.7
ccr99560
Chondrus crispus
4.5e-29
132.1
364
29.7
ccr05140
Chondrus crispus
2.9e-28
129.4
364
29.4
PSNMU-V1.4_AUG-EV-PASAV3_0121880
Pseudo-nitzschia multistriata
3.8e-28
129.0
237
35.0
ccr89200
Chondrus crispus
1.5e-27
127.1
281
32.0
ccr21120
Chondrus crispus
2.5e-27
126.3
364
29.1
ccr60800
Chondrus crispus
2.8e-26
122.9
330
29.4
Cre15.g634701
Chlamydomonas reinhardtii
2.6e-24
116.3
164
39.0
sya00G125990
Synedra acus
1.3e-20
104.0
459
24.0
emh133310
Emiliania huxleyi
2.0e-16
90.1
226
30.5
SPAC212.11
Schizosaccharomyces pombe
5.8e-16
88.6
369
26.6
SPBCPT2R1.08c
Schizosaccharomyces pombe
5.8e-16
88.6
369
26.6
ccr05300
Chondrus crispus
1.7e-15
87.0
198
31.3
ccr161860
Chondrus crispus
2.9e-15
86.3
233
26.6
gene16674
Fragilariopsis cylindrus
4.1e-14
82.4
87
42.5
emh329330
Emiliania huxleyi
7.0e-14
81.6
299
27.1
emh313240
Emiliania huxleyi
1.3e-12
77.4
358
26.3
sya00G45820
Synedra acus
3.0e-12
76.3
58
53.4
pte222390
Paramecium tetraurelia
6.6e-12
75.1
125
36.8
tho124700
Thalassiosira oceanica
8.6e-12
74.7
460
21.7
AT5G63120
Arabidopsis thaliana
2.5e-11
73.2
355
23.4
ccr136860
Chondrus crispus
7.3e-11
71.6
189
30.7
AT3G01540
Arabidopsis thaliana
1.2e-10
70.9
363
22.0
ENSG00000163312
Homo sapiens
1.2e-10
70.9
398
22.9
emh127750
Emiliania huxleyi
2.1e-10
70.1
202
26.7
Cre03.g200095
Chlamydomonas reinhardtii
1.4e-09
67.4
385
24.2
Pp3c27_1440
Physcomitrella patens
6.8e-09
65.1
367
23.4
emh548420
Emiliania huxleyi
8.9e-09
64.7
49
53.1
emh281160
Emiliania huxleyi
8.9e-09
64.7
200
26.5
CC00G63620
Cyclotella cryptica
1.2e-08
64.3
192
29.2
Naga_100027g46
Nannochloropsis gaditana
1.2e-08
64.3
132
36.4
pte534150
Paramecium tetraurelia
2.6e-08
63.2
369
21.7
Pp3c8_1190
Physcomitrella patens
5.8e-08
62.0
345
22.6
WBGene00010260
Caenorhabditis elegans
1.3e-07
60.8
358
20.7
tho414540
Thalassiosira oceanica
2.9e-07
59.7
253
25.7
Pp3c2_2520
Physcomitrella patens
3.7e-07
59.3
153
23.5
emh360520
Emiliania huxleyi
6.4e-07
58.5
69
50.7
Ec-17_003860
Ectocarpus siliculosus
2.4e-06
56.6
64
39.1
tho17720
Thalassiosira oceanica
2.4e-06
56.6
196
26.0
FBgn0029979
Drosophila melanogaster
3.2e-06
56.2
351
22.2
emh360540
Emiliania huxleyi
3.2e-06
56.2
76
34.2
SPAC23A1.19c
Schizosaccharomyces pombe
3.2e-06
56.2
361
21.3
FBgn0035720
Drosophila melanogaster
7.0e-06
55.1
404
23.0
Pp3s405_10
Physcomitrella patens
7.0e-06
55.1
365
21.4
AT1G55150
Arabidopsis thaliana
9.2e-06
54.7
334
23.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (5 genes)
Thalassiosira pseudonana (5 genes)
Thalassiosira oceanica (9 genes)
Pseudo-nitzschia multiseries (5 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (6 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (7 genes)
Nannochloropsis gaditana (6 genes)
Homo sapiens (6 genes)
Drosophila melanogaster (5 genes)
Caenorhabditis elegans (5 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (4 genes)
Arabidopsis thaliana (10 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (18 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (18 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (5 genes)
Synedra acus (11 genes)
Physcomitrella patens (10 genes)
Chlamydomonas reinhardtii (7 genes)
Pseudo-nitzschia multistriata (5 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing