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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-07_003170
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-07_003170
Ectocarpus siliculosus
1.0e-232
807.0
383
100.0
tps215990
Thalassiosira pseudonana
3.2e-45
184.1
331
34.1
ptri164470
Phaeodactylum tricornutum
4.0e-43
177.2
326
32.2
ps00G134570
Pseudo-nitzschia multiseries
1.3e-41
172.2
341
31.7
ENSG00000085415
Homo sapiens
3.1e-40
167.5
345
30.7
PSNMU-V1.4_AUG-EV-PASAV3_0121290
Pseudo-nitzschia multistriata
4.1e-40
167.2
326
31.0
CC00G155200
Cyclotella cryptica
3.8e-38
160.6
335
32.5
Sro909_g218970
Seminavis robusta
5.0e-38
160.2
389
30.1
YGL100W
Saccharomyces cerevisiae strain S288C
1.1e-32
142.5
364
29.9
SPAC15F9.02
Schizosaccharomyces pombe
3.1e-32
141.0
331
28.1
fso166270
Fistulifera solaris
9.1e-32
139.4
343
29.2
sya00G114070
Synedra acus
9.1e-32
139.4
358
30.7
fso62050
Fistulifera solaris
2.7e-31
137.9
345
29.9
gsu58970
Galdieria sulphuraria
7.7e-31
136.3
327
32.7
FBgn0033247
Drosophila melanogaster
2.8e-28
127.9
340
27.6
FBgn0024509
Drosophila melanogaster
1.3e-25
119.0
335
30.1
fso129150
Fistulifera solaris
7.8e-23
109.8
345
27.2
gsu79930
Galdieria sulphuraria
8.6e-22
106.3
328
26.5
WBGene00003804
Caenorhabditis elegans
5.6e-21
103.6
318
26.7
pte460870
Paramecium tetraurelia
9.5e-21
102.8
260
27.3
Cre17.g715750
Chlamydomonas reinhardtii
2.8e-20
101.3
329
28.3
Sro702_g189930
Seminavis robusta
6.1e-20
100.1
339
26.8
CC00G140360
Cyclotella cryptica
8.0e-20
99.8
351
27.9
CM10G01140
Cyanidioschyzon merolae
1.0e-19
99.4
395
27.3
Pp3c5_28960
Physcomitrella patens
1.4e-19
99.0
338
26.6
AA0009G02590
Aureococcus anophagefferens
8.9e-19
96.3
328
27.1
fso53520
Fistulifera solaris
1.5e-18
95.5
345
25.2
ccr56640
Chondrus crispus
7.5e-18
93.2
324
29.3
emh352120
Emiliania huxleyi
1.1e-16
89.4
320
25.6
tps29610
Thalassiosira pseudonana
1.9e-16
88.6
333
25.5
WBGene00003806
Caenorhabditis elegans
4.6e-15
84.0
272
25.7
Pp3c19_12500
Physcomitrella patens
5.0e-14
80.5
91
41.8
Naga_101101g1
Nannochloropsis gaditana
8.6e-14
79.7
153
32.7
AT1G64350
Arabidopsis thaliana
2.5e-13
78.2
329
24.0
Pp3c22_17920
Physcomitrella patens
5.6e-13
77.0
91
37.4
gene1572
Fragilariopsis cylindrus
4.7e-12
73.9
352
24.1
Pp3c22_20020
Physcomitrella patens
4.7e-12
73.9
91
37.4
emh224540
Emiliania huxleyi
1.4e-11
72.4
93
37.6
ptri231850
Phaeodactylum tricornutum
1.4e-11
72.4
342
22.8
Pp3c19_9370
Physcomitrella patens
1.8e-11
72.0
91
37.4
gene14464
Fragilariopsis cylindrus
3.1e-11
71.2
352
23.9
sya00G144690
Synedra acus
4.0e-11
70.9
93
40.9
pte420310
Paramecium tetraurelia
3.4e-10
67.8
314
19.7
ps00G174630
Pseudo-nitzschia multiseries
5.8e-10
67.0
93
38.7
ENSG00000157020
Homo sapiens
2.2e-09
65.1
334
20.7
PSNMU-V1.4_AUG-EV-PASAV3_0095210
Pseudo-nitzschia multistriata
8.3e-09
63.2
79
39.2
Ec-12_007790
Ectocarpus siliculosus
1.9e-08
62.0
96
35.4
Naga_101320g1
Nannochloropsis gaditana
1.6e-07
58.9
89
34.8
pte445730
Paramecium tetraurelia
1.6e-07
58.9
120
27.5
tho667320
Thalassiosira oceanica
2.1e-07
58.5
59
49.2
SPBC215.15
Schizosaccharomyces pombe
2.7e-07
58.2
68
36.8
pte758460
Paramecium tetraurelia
1.7e-06
55.5
89
31.5
Sro369_g128140
Seminavis robusta
6.6e-06
53.5
310
24.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (3 genes)
Synedra acus (2 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing