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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-06_007410
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-06_007410
Ectocarpus siliculosus
0.0e+00
1171.0
964
100.0
ENSG00000154767
Homo sapiens
2.2e-35
152.9
366
31.1
gsu84710
Galdieria sulphuraria
4.8e-35
151.8
371
30.5
Pp3c22_7360
Physcomitrella patens
5.4e-34
148.3
380
30.0
gsu84730
Galdieria sulphuraria
9.1e-34
147.5
360
30.8
AT5G16630
Arabidopsis thaliana
2.9e-32
142.5
327
31.2
ps00G00900
Pseudo-nitzschia multiseries
1.1e-31
140.6
246
34.6
FBgn0004698
Drosophila melanogaster
7.2e-31
137.9
365
29.9
tho22820
Thalassiosira oceanica
1.6e-30
136.7
399
27.6
ccr45960
Chondrus crispus
1.0e-29
134.0
197
37.1
CC00G186920
Cyclotella cryptica
2.3e-29
132.9
269
29.7
fso03010
Fistulifera solaris
3.0e-29
132.5
439
30.1
PSNMU-V1.4_AUG-EV-PASAV3_0001760
Pseudo-nitzschia multistriata
3.0e-29
132.5
279
31.5
sya00G202080
Synedra acus
4.0e-29
132.1
359
26.7
Sro256_g100640
Seminavis robusta
1.2e-28
130.6
430
24.7
gene2837
Fragilariopsis cylindrus
7.5e-28
127.9
281
30.6
ptri94610
Phaeodactylum tricornutum
1.8e-26
123.2
435
25.3
WBGene00022296
Caenorhabditis elegans
3.1e-26
122.5
373
27.1
SPCC4G3.10c
Schizosaccharomyces pombe
5.4e-26
121.7
259
33.6
CM12G00970
Cyanidioschyzon merolae
1.3e-24
117.1
273
30.4
Cre12.g557400
Chlamydomonas reinhardtii
1.3e-24
117.1
309
28.2
emh442260
Emiliania huxleyi
2.8e-22
109.4
216
33.3
emh384350
Emiliania huxleyi
2.8e-22
109.4
216
33.3
SPAC12B10.12c
Schizosaccharomyces pombe
8.0e-22
107.8
367
26.4
YER162C
Saccharomyces cerevisiae strain S288C
1.2e-20
104.0
380
27.1
fso166870
Fistulifera solaris
2.6e-20
102.8
399
26.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing