Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-06_006730
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-06_006730
Ectocarpus siliculosus
7.2e-179
627.9
324
100.0
ptri147210
Phaeodactylum tricornutum
3.2e-54
213.8
321
36.1
PSNMU-V1.4_AUG-EV-PASAV3_0119840
Pseudo-nitzschia multistriata
3.6e-53
210.3
339
35.7
Sro793_g203250
Seminavis robusta
1.5e-51
204.9
319
35.1
CC00G97960
Cyclotella cryptica
4.4e-51
203.4
322
36.6
gene10966
Fragilariopsis cylindrus
1.7e-50
201.4
339
34.2
fso195340
Fistulifera solaris
2.2e-50
201.1
319
36.1
fso139650
Fistulifera solaris
2.8e-50
200.7
319
35.7
tps15640
Thalassiosira pseudonana
4.8e-50
199.9
319
35.7
Pp3c13_4510
Physcomitrella patens
2.4e-49
197.6
320
36.6
ps00G170170
Pseudo-nitzschia multiseries
9.1e-49
195.7
350
33.7
Cre12.g527300
Chlamydomonas reinhardtii
2.0e-48
194.5
320
35.6
ENSG00000111445
Homo sapiens
7.7e-48
192.6
320
35.0
pte66270
Paramecium tetraurelia
2.9e-47
190.7
326
33.4
CM15G01450
Cyanidioschyzon merolae
5.0e-47
189.9
318
34.9
Ec-02_003410
Ectocarpus siliculosus
2.7e-45
184.1
318
33.3
gsu15030
Galdieria sulphuraria
4.7e-45
183.3
321
35.2
YNL290W
Saccharomyces cerevisiae strain S288C
6.1e-45
183.0
319
34.5
gsu130720
Galdieria sulphuraria
8.0e-45
182.6
321
35.2
WBGene00018409
Caenorhabditis elegans
2.3e-44
181.0
326
32.5
SPAC27E2.10c
Schizosaccharomyces pombe
5.2e-44
179.9
317
32.8
ccr162100
Chondrus crispus
6.7e-44
179.5
323
33.1
AA0004G04040
Aureococcus anophagefferens
9.7e-43
175.6
321
32.1
FBgn0032244
Drosophila melanogaster
1.7e-42
174.9
319
32.9
AT1G77470
Arabidopsis thaliana
3.7e-42
173.7
322
34.2
sya00G13320
Synedra acus
6.3e-42
172.9
210
41.0
emh485910
Emiliania huxleyi
1.1e-41
172.2
328
32.6
ENSG00000163918
Homo sapiens
2.7e-40
167.5
322
33.9
pte233530
Paramecium tetraurelia
1.2e-37
158.7
318
30.2
YJR068W
Saccharomyces cerevisiae strain S288C
2.1e-37
157.9
216
38.9
emh282200
Emiliania huxleyi
4.7e-37
156.8
301
35.2
Ec-06_005100
Ectocarpus siliculosus
1.4e-36
155.2
332
31.6
Ec-08_003900
Ectocarpus siliculosus
1.8e-36
154.8
319
30.1
pte259470
Paramecium tetraurelia
4.0e-36
153.7
257
36.6
AT1G63160
Arabidopsis thaliana
5.7e-35
149.8
258
36.0
ENSG00000049541
Homo sapiens
9.8e-35
149.1
252
33.7
sya00G204900
Synedra acus
9.8e-35
149.1
236
36.9
FBgn0260985
Drosophila melanogaster
1.3e-34
148.7
258
34.9
PSNMU-V1.4_AUG-EV-PASAV3_0005500
Pseudo-nitzschia multistriata
1.3e-34
148.7
240
35.4
FBgn0030871
Drosophila melanogaster
4.8e-34
146.7
314
31.2
Pp3c16_21800
Physcomitrella patens
4.8e-34
146.7
321
34.0
Ec-02_004800
Ectocarpus siliculosus
6.3e-34
146.4
238
36.1
AA0011G02360
Aureococcus anophagefferens
8.3e-34
146.0
238
37.4
ccr112700
Chondrus crispus
1.8e-33
144.8
334
29.3
CC00G48970
Cyclotella cryptica
2.4e-33
144.4
240
35.4
gene13290
Fragilariopsis cylindrus
3.1e-33
144.1
263
34.6
fso168430
Fistulifera solaris
5.4e-33
143.3
237
36.3
ps00G185310
Pseudo-nitzschia multiseries
5.4e-33
143.3
239
35.1
fso151940
Fistulifera solaris
7.0e-33
142.9
237
36.3
CM12G03070
Cyanidioschyzon merolae
9.1e-33
142.5
338
31.1
ptri32500
Phaeodactylum tricornutum
1.2e-32
142.1
238
35.3
WBGene00004338
Caenorhabditis elegans
2.0e-32
141.4
248
33.5
Sro262_g102000
Seminavis robusta
2.7e-32
141.0
350
29.7
gene10044
Fragilariopsis cylindrus
3.5e-32
140.6
333
29.7
Pp3c3_37360
Physcomitrella patens
3.5e-32
140.6
311
28.9
tps141030
Thalassiosira pseudonana
4.5e-32
140.2
320
30.6
AT1G21690
Arabidopsis thaliana
7.7e-32
139.4
222
34.7
Naga_100413g2
Nannochloropsis gaditana
7.7e-32
139.4
275
32.7
Cre07.g337150
Chlamydomonas reinhardtii
1.0e-31
139.0
230
36.1
tho295520
Thalassiosira oceanica
1.7e-31
138.3
256
34.4
gsu38630
Galdieria sulphuraria
2.3e-31
137.9
254
32.7
ptri219300
Phaeodactylum tricornutum
2.9e-31
137.5
342
29.8
CM06G01100
Cyanidioschyzon merolae
3.8e-31
137.1
245
33.5
Sro730_g194110
Seminavis robusta
3.8e-31
137.1
236
35.6
tps213810
Thalassiosira pseudonana
6.5e-31
136.3
238
34.9
ccr38980
Chondrus crispus
8.6e-31
136.0
267
33.3
emh456660
Emiliania huxleyi
8.6e-31
136.0
230
33.9
emh490460
Emiliania huxleyi
1.1e-30
135.6
230
33.9
Cre06.g251800
Chlamydomonas reinhardtii
1.9e-30
134.8
326
29.4
WBGene00004340
Caenorhabditis elegans
2.5e-30
134.4
211
35.1
CC00G176000
Cyclotella cryptica
2.5e-30
134.4
348
27.9
SPAC23D3.02
Schizosaccharomyces pombe
3.2e-30
134.0
318
28.0
Naga_100080g2
Nannochloropsis gaditana
5.5e-30
133.3
199
37.2
PSNMU-V1.4_AUG-EV-PASAV3_0059640
Pseudo-nitzschia multistriata
9.5e-30
132.5
375
28.3
sya00G173570
Synedra acus
1.2e-29
132.1
340
30.3
YOL094C
Saccharomyces cerevisiae strain S288C
1.6e-29
131.7
261
33.7
fso131870
Fistulifera solaris
2.8e-29
131.0
351
28.2
SPAC1687.03c
Schizosaccharomyces pombe
2.8e-29
131.0
230
33.5
fso10320
Fistulifera solaris
6.8e-28
126.3
332
28.0
gsu138090
Galdieria sulphuraria
4.4e-27
123.6
208
34.1
Sro530_g161220
Seminavis robusta
1.3e-26
122.1
259
30.9
Ec-06_005940
Ectocarpus siliculosus
2.2e-26
121.3
244
32.4
gene20923
Fragilariopsis cylindrus
2.2e-26
121.3
302
29.1
ps00G155250
Pseudo-nitzschia multiseries
2.7e-24
114.4
348
25.6
tho127820
Thalassiosira oceanica
4.5e-24
113.6
346
25.4
tps118600
Thalassiosira pseudonana
5.4e-17
90.1
246
29.3
Sro142_g066280
Seminavis robusta
4.6e-16
87.0
351
23.9
Naga_100093g7
Nannochloropsis gaditana
5.0e-15
83.6
234
25.6
CC00G116610
Cyclotella cryptica
1.5e-14
82.0
247
27.1
sya00G47630
Synedra acus
2.5e-14
81.3
347
25.9
AT5G27740
Arabidopsis thaliana
3.3e-14
80.9
209
25.4
sya00G65660
Synedra acus
3.3e-14
80.9
347
25.9
sya00G259220
Synedra acus
5.6e-14
80.1
347
25.6
sya00G186430
Synedra acus
2.8e-13
77.8
77
42.9
fso106870
Fistulifera solaris
3.6e-13
77.4
236
24.2
fso193870
Fistulifera solaris
3.6e-13
77.4
236
24.2
WBGene00004339
Caenorhabditis elegans
4.7e-13
77.0
249
24.9
gene17681
Fragilariopsis cylindrus
6.2e-13
76.6
253
26.9
pte639640
Paramecium tetraurelia
8.0e-13
76.3
251
21.9
ps00G65170
Pseudo-nitzschia multiseries
1.4e-12
75.5
199
28.1
tho47620
Thalassiosira oceanica
1.4e-12
75.5
249
24.9
AA0001G02560
Aureococcus anophagefferens
2.3e-12
74.7
355
24.2
YBR087W
Saccharomyces cerevisiae strain S288C
4.0e-12
73.9
253
24.9
emh514960
Emiliania huxleyi
5.2e-12
73.6
84
41.7
ENSG00000133119
Homo sapiens
5.2e-12
73.6
211
25.6
Cre16.g679950
Chlamydomonas reinhardtii
1.2e-11
72.4
234
22.6
FBgn0028700
Drosophila melanogaster
2.6e-11
71.2
238
22.3
Pp3c25_5630
Physcomitrella patens
3.4e-11
70.9
210
24.3
gsu106230
Galdieria sulphuraria
5.8e-11
70.1
227
27.3
pte295110
Paramecium tetraurelia
7.5e-11
69.7
152
34.9
Pp3c22_21030
Physcomitrella patens
1.3e-10
68.9
239
25.9
ptri207520
Phaeodactylum tricornutum
1.7e-10
68.6
258
24.0
PSNMU-V1.4_AUG-EV-PASAV3_0086790
Pseudo-nitzschia multistriata
2.9e-10
67.8
279
22.2
emh328310
Emiliania huxleyi
6.4e-10
66.6
224
26.3
AT5G22010
Arabidopsis thaliana
8.3e-10
66.2
245
24.5
SPBC83.14c
Schizosaccharomyces pombe
9.2e-09
62.8
230
21.7
ccr77340
Chondrus crispus
2.7e-08
61.2
342
22.8
SPBC23E6.07c
Schizosaccharomyces pombe
4.6e-08
60.5
251
25.9
gsu50360
Galdieria sulphuraria
6.0e-08
60.1
230
22.2
emh626820
Emiliania huxleyi
1.0e-07
59.3
239
21.8
emh160620
Emiliania huxleyi
1.0e-07
59.3
239
21.8
Cre12.g521200
Chlamydomonas reinhardtii
3.0e-07
57.8
253
23.7
sya00G92470
Synedra acus
4.3e-06
53.9
344
23.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (6 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (4 genes)
Saccharomyces cerevisiae strain S288C (4 genes)
Schizosaccharomyces pombe (5 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (4 genes)
Galdieria sulphuraria (6 genes)
Emiliania huxleyi (8 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (5 genes)
Synedra acus (8 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (5 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing