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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-05_005360
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-05_005360
Ectocarpus siliculosus
6.7e-95
349.4
170
100.0
Ec-08_000390
Ectocarpus siliculosus
1.9e-33
145.2
174
44.8
Ec-02_001090
Ectocarpus siliculosus
3.1e-31
137.9
159
50.3
Ec-02_000110
Ectocarpus siliculosus
2.0e-30
135.2
146
52.1
Ec-07_007330
Ectocarpus siliculosus
3.4e-30
134.4
144
52.8
Ec-11_000430
Ectocarpus siliculosus
4.4e-30
134.0
145
53.1
Ec-08_001440
Ectocarpus siliculosus
2.2e-29
131.7
172
42.4
Ec-17_000140
Ectocarpus siliculosus
2.9e-29
131.3
168
48.2
Ec-17_000130
Ectocarpus siliculosus
6.4e-29
130.2
169
47.3
Ec-25_000420
Ectocarpus siliculosus
2.4e-28
128.3
164
43.9
Ec-13_004770
Ectocarpus siliculosus
1.7e-26
122.1
173
41.0
Ec-04_001420
Ectocarpus siliculosus
3.0e-26
121.3
143
49.7
Ec-19_004490
Ectocarpus siliculosus
8.6e-26
119.8
174
41.4
Ec-25_003520
Ectocarpus siliculosus
1.5e-25
119.0
136
47.8
Ec-08_000170
Ectocarpus siliculosus
1.2e-22
109.4
165
40.6
Ec-13_003910
Ectocarpus siliculosus
2.1e-19
98.6
160
41.9
Ec-06_001710
Ectocarpus siliculosus
5.1e-18
94.0
143
41.3
Ec-23_003980
Ectocarpus siliculosus
5.1e-18
94.0
59
71.2
Ec-13_004340
Ectocarpus siliculosus
1.5e-17
92.4
161
38.5
Ec-23_003090
Ectocarpus siliculosus
3.3e-17
91.3
155
40.0
Ec-19_004420
Ectocarpus siliculosus
8.1e-16
86.7
58
65.5
Ec-13_004370
Ectocarpus siliculosus
1.1e-15
86.3
156
36.5
Ec-11_002260
Ectocarpus siliculosus
1.8e-15
85.5
146
38.4
Ec-14_001110
Ectocarpus siliculosus
2.4e-15
85.1
126
42.1
Ec-13_003900
Ectocarpus siliculosus
4.0e-15
84.3
160
36.9
Ec-06_003620
Ectocarpus siliculosus
1.5e-14
82.4
134
40.3
Ec-13_004140
Ectocarpus siliculosus
7.6e-14
80.1
167
35.9
Ec-13_004190
Ectocarpus siliculosus
9.9e-14
79.7
129
39.5
Ec-17_003140
Ectocarpus siliculosus
1.3e-13
79.3
126
42.1
Ec-03_001700
Ectocarpus siliculosus
1.1e-12
76.3
138
37.0
Ec-13_002720
Ectocarpus siliculosus
2.4e-12
75.1
88
50.0
Ec-15_002970
Ectocarpus siliculosus
7.1e-12
73.6
136
43.4
Ec-13_004220
Ectocarpus siliculosus
9.2e-12
73.2
85
48.2
Ec-13_003890
Ectocarpus siliculosus
7.8e-11
70.1
90
47.8
Ec-04_001505
Ectocarpus siliculosus
3.9e-10
67.8
92
46.7
Ec-04_001510
Ectocarpus siliculosus
3.9e-10
67.8
92
46.7
Ec-04_003860
Ectocarpus siliculosus
1.9e-09
65.5
208
30.8
Ec-08_001290
Ectocarpus siliculosus
1.6e-08
62.4
113
37.2
Ec-17_002780
Ectocarpus siliculosus
2.1e-08
62.0
126
37.3
Ec-03_001690
Ectocarpus siliculosus
1.8e-07
58.9
130
34.6
Ec-06_002980
Ectocarpus siliculosus
4.4e-06
54.3
62
46.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (41 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing