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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-04_000720
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-04_000720
Ectocarpus siliculosus
0.0e+00
2679.8
1855
100.0
Cre12.g550800
Chlamydomonas reinhardtii
1.1e-95
354.0
465
43.7
Naga_100015g71
Nannochloropsis gaditana
5.7e-95
351.7
440
45.2
Pp3c22_4740
Physcomitrella patens
4.7e-89
332.0
446
43.3
AT5G44750
Arabidopsis thaliana
2.4e-77
293.1
454
40.1
FBgn0035150
Drosophila melanogaster
6.3e-70
268.5
494
34.0
ENSG00000135945
Homo sapiens
5.4e-69
265.4
514
33.7
gsu142230
Galdieria sulphuraria
3.2e-66
256.1
469
35.8
ccr44120
Chondrus crispus
1.7e-62
243.8
465
35.3
Sro142_g066040
Seminavis robusta
2.2e-62
243.4
464
35.6
fso119250
Fistulifera solaris
4.9e-62
242.3
463
34.3
ps00G09480
Pseudo-nitzschia multiseries
1.8e-61
240.4
485
32.8
sya00G09980
Synedra acus
7.0e-61
238.4
480
34.6
sya00G66530
Synedra acus
1.6e-60
237.3
480
34.8
ptri32900
Phaeodactylum tricornutum
4.5e-60
235.7
469
33.3
tps112730
Thalassiosira pseudonana
5.9e-60
235.3
470
35.3
PSNMU-V1.4_AUG-EV-PASAV3_0106360
Pseudo-nitzschia multistriata
8.6e-59
231.5
487
31.8
gene17968
Fragilariopsis cylindrus
2.6e-55
219.9
485
32.4
CC00G156980
Cyclotella cryptica
9.2e-53
211.5
507
32.3
WBGene00014066
Caenorhabditis elegans
2.0e-52
210.3
455
31.4
fso30800
Fistulifera solaris
7.8e-52
208.4
397
33.2
SPBC1347.01c
Schizosaccharomyces pombe
3.0e-51
206.5
448
33.3
tho187600
Thalassiosira oceanica
6.6e-51
205.3
469
32.6
emh627140
Emiliania huxleyi
1.8e-48
197.2
454
32.4
CM19G02820
Cyanidioschyzon merolae
9.8e-47
191.4
498
32.5
emh109120
Emiliania huxleyi
5.6e-42
175.6
451
32.2
YOR346W
Saccharomyces cerevisiae strain S288C
3.5e-36
156.4
468
28.8
AT1G49980
Arabidopsis thaliana
7.1e-29
132.1
398
30.9
Cre02.g079850
Chlamydomonas reinhardtii
2.6e-23
113.6
366
29.5
SPCC553.07c
Schizosaccharomyces pombe
7.6e-23
112.1
408
26.0
pte531460
Paramecium tetraurelia
4.9e-22
109.4
388
26.5
pte538790
Paramecium tetraurelia
1.1e-21
108.2
388
25.8
gsu07230
Galdieria sulphuraria
3.5e-20
103.2
327
26.3
ENSG00000101751
Homo sapiens
1.5e-18
97.8
346
24.6
Ec-14_004450
Ectocarpus siliculosus
8.1e-17
92.0
112
43.8
ENSG00000122008
Homo sapiens
5.3e-16
89.4
290
24.1
ENSG00000170734
Homo sapiens
1.7e-14
84.3
383
25.1
Pp3c8_17250
Physcomitrella patens
1.1e-13
81.6
343
27.7
WBGene00017696
Caenorhabditis elegans
4.2e-13
79.7
388
22.7
FBgn0037554
Drosophila melanogaster
7.1e-13
79.0
325
25.8
Naga_100321g4
Nannochloropsis gaditana
1.6e-12
77.8
113
39.8
CM13G02840
Cyanidioschyzon merolae
2.1e-12
77.4
337
24.6
emh482430
Emiliania huxleyi
2.1e-12
77.4
108
39.8
emh197460
Emiliania huxleyi
2.1e-12
77.4
108
39.8
gsu33630
Galdieria sulphuraria
6.0e-12
75.9
296
25.3
Pp3c14_23660
Physcomitrella patens
1.0e-11
75.1
355
22.5
ptri209620
Phaeodactylum tricornutum
2.3e-11
73.9
411
26.0
AA0021G00260
Aureococcus anophagefferens
3.9e-11
73.2
118
38.1
AT5G44740
Arabidopsis thaliana
3.9e-11
73.2
345
25.8
FBgn0037141
Drosophila melanogaster
8.7e-11
72.0
122
36.9
gene8065
Fragilariopsis cylindrus
9.6e-10
68.6
250
26.8
Ec-01_006080
Ectocarpus siliculosus
3.6e-09
66.6
378
24.9
Sro1969_g308490
Seminavis robusta
3.6e-09
66.6
461
23.2
tho441720
Thalassiosira oceanica
6.2e-09
65.9
379
23.5
emh217920
Emiliania huxleyi
2.4e-08
63.9
217
27.2
AA0174G00010
Aureococcus anophagefferens
4.0e-08
63.2
109
42.2
emh455840
Emiliania huxleyi
9.0e-08
62.0
217
26.7
WBGene00018721
Caenorhabditis elegans
2.0e-07
60.8
129
31.0
Cre03.g148050
Chlamydomonas reinhardtii
3.4e-07
60.1
151
28.5
fso58700
Fistulifera solaris
3.4e-07
60.1
116
35.3
Naga_100010g99
Nannochloropsis gaditana
4.5e-07
59.7
133
28.6
fso144890
Fistulifera solaris
5.8e-07
59.3
116
34.5
fso43860
Fistulifera solaris
4.9e-06
56.2
95
33.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (5 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing